RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 SKIDA1Q1XH10 827 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 FIGNQ5HY92 759 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 EFCAB2Q5VUJ9 269 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 BTBD8Q5XKL5 378 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 OVCH1Q7RTY7 1134 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 NLGN4XQ8N0W4 816 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 CISD2Q8N5K1 135 aaKnown RBP3.82□□□□□ -1.8
CALD1-221ENST00000489019 MBD6Q96DN6 1003 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 MRPL4Q9BYD3 311 aaKnown RBP3.82□□□□□ -1.8
CALD1-221ENST00000489019 L2HGDHQ9H9P8 463 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 SLC39A2Q9NP94 309 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 KCND1Q9NSA2 647 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 RIC8BQ9NVN3 520 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 ZFP69BQ9UJL9 534 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 NUB1Q9Y5A7 615 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 TTC37Q6PGP7 1564 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 UHRF1BP1LA0JNW5 1464 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 B4GALT3O60512 393 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 KLHL18O94889 574 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 KNG1P01042 644 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 C4BPAP04003 597 aaKnown RBP3.81□□□□□ -1.8
CALD1-221ENST00000489019 ENO2P09104 434 aaPredicted RBP3.81□□□□□ -1.8
CALD1-221ENST00000489019 DBPQ10586 325 aaPredicted RBP3.81□□□□□ -1.8
CALD1-221ENST00000489019 NBPF8Q3BBV2 869 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 FAM47CQ5HY64 1035 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 UBXN11Q5T124 520 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 CPZQ66K79 652 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 TRMT10BQ6PF06 316 aaKnown RBP3.81□□□□□ -1.8
CALD1-221ENST00000489019 HHIPL2Q6UWX4 724 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 NOSTRINQ8IVI9 506 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 STPG3Q8N7X2 389 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 NUDT10Q8NFP7 164 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 SH3TC2Q8TF17 1288 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 NUDT11Q96G61 164 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 LCORQ96JN0 433 aaPredicted RBP3.81□□□□□ -1.8
CALD1-221ENST00000489019 MAGEB10Q96LZ2 347 aaPredicted RBP3.81□□□□□ -1.8
CALD1-221ENST00000489019 WRNIP1Q96S55 665 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 TACO1Q9BSH4 297 aaKnown RBP3.81□□□□□ -1.8
CALD1-221ENST00000489019 BDH2Q9BUT1 245 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 CELF4Q9BZC1 486 aaKnown RBP3.81□□□□□ -1.8
CALD1-221ENST00000489019 ARHGAP20Q9P2F6 1191 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 INVSQ9Y283 1065 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 ATP23Q9Y6H3 246 aa3.81□□□□□ -1.8
CALD1-221ENST00000489019 KDM5BQ9UGL1 1544 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 TEX14Q8IWB6 1497 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 MBD5Q9P267 1494 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 PLCH2O75038 1416 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 CNTLNQ9NXG0 1405 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 WASHC2AQ641Q2 1341 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 C9orf118A6NHY6 69 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 PLD2O14939 933 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 PPP1R12AO14974 1030 aaPredicted RBP3.8□□□□□ -1.8
CALD1-221ENST00000489019 GSTA4O15217 222 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 CLASP2O75122 1294 aaKnown RBP3.8□□□□□ -1.8
CALD1-221ENST00000489019 CYP7B1O75881 506 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 CYP1A1P04798 512 aaPredicted RBP3.8□□□□□ -1.8
CALD1-221ENST00000489019 CELA3BP08861 270 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 MC4RP32245 332 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 KRTAP10-2P60368 255 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 KIAA2012Q0VF49 1180 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 CNGB1Q14028 1251 aaPredicted RBP3.8□□□□□ -1.8
CALD1-221ENST00000489019 SMAD2Q15796 467 aaKnown RBP3.8□□□□□ -1.8
CALD1-221ENST00000489019 TBC1D10BQ4KMP7 808 aaPredicted RBP3.8□□□□□ -1.8
CALD1-221ENST00000489019 IGDCC4Q8TDY8 1250 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 MRFAP1L1Q96HT8 127 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 RBM15Q96T37 977 aaKnown RBP eCLIP3.8□□□□□ -1.8
CALD1-221ENST00000489019 CARD11Q9BXL7 1154 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 TMEM168Q9H0V1 697 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 MAST1Q9Y2H9 1570 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 KDM5DQ9BY66 1539 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 FAM135AQ9P2D6 1515 aa3.8□□□□□ -1.8
CALD1-221ENST00000489019 CCDC144AA2RUR9 1427 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 CCDC7Q96M83 1385 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 SPAG9O60271 1321 aaKnown RBP3.79□□□□□ -1.8
CALD1-221ENST00000489019 ESYT3A0FGR9 886 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 RASSF10A6NK89 507 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 SCDO00767 359 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 DNAJC8O75937 253 aaPredicted RBP3.79□□□□□ -1.8
CALD1-221ENST00000489019 GJA4P35212 333 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 PLP2Q04941 152 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 NFATC3Q12968 1075 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 FNDC3BQ53EP0 1204 aaKnown RBP3.79□□□□□ -1.8
CALD1-221ENST00000489019 PKN3Q6P5Z2 889 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 LGI4Q8N135 537 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 IGSF22Q8N9C0 903 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 SSBP3Q9BWW4 388 aaPredicted RBP3.79□□□□□ -1.8
CALD1-221ENST00000489019 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 TMEM260Q9NX78 707 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 BTBD7Q9P203 1132 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 FTSJ1Q9UET6 329 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 DUOX2Q9NRD8 1548 aa3.79□□□□□ -1.8
CALD1-221ENST00000489019 ERBINQ96RT1 1412 aa3.78□□□□□ -1.8
CALD1-221ENST00000489019 ROCK2O75116 1388 aaKnown RBP3.78□□□□□ -1.8
CALD1-221ENST00000489019 USP47Q96K76 1375 aa3.78□□□□□ -1.8
CALD1-221ENST00000489019 KIF7Q2M1P5 1343 aa3.78□□□□□ -1.8
CALD1-221ENST00000489019 PLXNC1O60486 1568 aa3.78□□□□□ -1.8
CALD1-221ENST00000489019 PRAMEF25A6NGN4 478 aa3.78□□□□□ -1.8
CALD1-221ENST00000489019 GLRX3O76003 335 aaKnown RBP3.78□□□□□ -1.8
CALD1-221ENST00000489019 FBXO21O94952 628 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms