RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ERCC4Q92889 916 aaPredicted RBP17.83■□□□□ 0.44
CLDN11-208ENST00000488989 SMARCE1Q969G3 411 aa17.83■□□□□ 0.44
CLDN11-208ENST00000488989 CEP89Q96ST8 783 aa17.83■□□□□ 0.44
CLDN11-208ENST00000488989 FUCA2Q9BTY2 467 aa17.83■□□□□ 0.44
CLDN11-208ENST00000488989 BLZF1Q9H2G9 400 aa17.83■□□□□ 0.44
CLDN11-208ENST00000488989 BMP2KQ9NSY1 1161 aaPredicted RBP17.83■□□□□ 0.44
CLDN11-208ENST00000488989 EVPLQ92817 2033 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 PVALEFA0A1B0GWK0 134 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 SYCE3A1L190 88 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 FRMD3A2A2Y4 597 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 HBP1O60381 514 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 KPNA6O60684 536 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 F2P00734 622 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 SSBP05455 408 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLDN11-208ENST00000488989 GUCY2CP25092 1073 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 LBX1P52954 281 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 IRX5P78411 483 aaPredicted RBP17.82■□□□□ 0.44
CLDN11-208ENST00000488989 PKN2Q16513 984 aaKnown RBP17.82■□□□□ 0.44
CLDN11-208ENST00000488989 FSCN1Q16658 493 aaKnown RBP17.82■□□□□ 0.44
CLDN11-208ENST00000488989 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 PLA2G4FQ68DD2 849 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 UNC13DQ70J99 1090 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 TRIML1Q8N9V2 468 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 RUSC1Q9BVN2 902 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 TIPINQ9BVW5 301 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 GZF1Q9H116 711 aaPredicted RBP17.82■□□□□ 0.44
CLDN11-208ENST00000488989 SPC25Q9HBM1 224 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 PDLIM7Q9NR12 457 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 CYP26B1Q9NR63 512 aa17.82■□□□□ 0.44
CLDN11-208ENST00000488989 SEPT9Q9UHD8 586 aaPredicted RBP17.82■□□□□ 0.44
CLDN11-208ENST00000488989 ZNF215Q9UL58 517 aaPredicted RBP17.82■□□□□ 0.44
CLDN11-208ENST00000488989 TMEM150BA6NC51 233 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 H3BRB1 525 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 HAS3O00219 553 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 RPN1P04843 607 aaKnown RBP17.81■□□□□ 0.44
CLDN11-208ENST00000488989 NPEPPSP55786 919 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 EHHADHQ08426 723 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 GIT2Q14161 759 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 LHX8Q68G74 356 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 FBXO46Q6PJ61 603 aaPredicted RBP17.81■□□□□ 0.44
CLDN11-208ENST00000488989 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 SH3TC2Q8TF17 1288 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 KAT2BQ92831 832 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 CEP170P1Q96L14 293 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 TUT1Q9H6E5 874 aaKnown RBP17.81■□□□□ 0.44
CLDN11-208ENST00000488989 XPNPEP3Q9NQH7 507 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 MAN1B1Q9UKM7 699 aa17.81■□□□□ 0.44
CLDN11-208ENST00000488989 COL1A2P08123 1366 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.8■□□□□ 0.44
CLDN11-208ENST00000488989 MYADML2A6NDP7 307 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 DGAT1O75907 488 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 RHOBTB3O94955 611 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 C6orf222P0C671 652 aaPredicted RBP17.8■□□□□ 0.44
CLDN11-208ENST00000488989 ZNF286BP0CG31 522 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 ASIC1P78348 528 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 PURAQ00577 322 aaKnown RBP17.8■□□□□ 0.44
CLDN11-208ENST00000488989 BEX3Q00994 111 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 CCSAPQ6IQ19 270 aaPredicted RBP17.8■□□□□ 0.44
CLDN11-208ENST00000488989 LRSAM1Q6UWE0 723 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 DYMQ7RTS9 669 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLDN11-208ENST00000488989 RNPEPQ9H4A4 650 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 DHX33Q9H6R0 707 aaKnown RBP17.8■□□□□ 0.44
CLDN11-208ENST00000488989 RMND1Q9NWS8 449 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 ODF2LQ9ULJ1 636 aa17.8■□□□□ 0.44
CLDN11-208ENST00000488989 TRIP12Q14669 1992 aaPredicted RBP17.8■□□□□ 0.44
CLDN11-208ENST00000488989 ZBTB42B2RXF5 422 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 ZEB2O60315 1214 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 PGK1P00558 417 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 MARK3P27448 753 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 ZNF131P52739 623 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 MORC3Q14149 939 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 MTERF2Q49AM1 385 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 KMT5BQ4FZB7 885 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 SLC9C1Q4G0N8 1177 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 ZNF484Q5JVG2 852 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 SASS6Q6UVJ0 657 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 CCDC43Q96MW1 224 aaKnown RBP17.79■□□□□ 0.44
CLDN11-208ENST00000488989 REEP2Q9BRK0 252 aa17.79■□□□□ 0.44
CLDN11-208ENST00000488989 PAK6Q9NQU5 681 aaPredicted RBP17.79■□□□□ 0.44
CLDN11-208ENST00000488989 NPHP3-ACAD11A0A0J9YXS1 232 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 USO1O60763 962 aaKnown RBP17.78■□□□□ 0.44
CLDN11-208ENST00000488989 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 RFC5P40937 340 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 NLRP12P59046 1061 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 TYRO3Q06418 890 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 MAPK7Q13164 816 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 GNASQ5JWF2 1037 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 CCDC65Q8IXS2 484 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 EXOC8Q8IYI6 725 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 MCPH1Q8NEM0 835 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 CCDC47Q96A33 483 aaKnown RBP17.78■□□□□ 0.44
CLDN11-208ENST00000488989 SH2D3AQ9BRG2 576 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 KATNAL1Q9BW62 490 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 GTPBP4Q9BZE4 634 aaKnown RBP17.78■□□□□ 0.44
CLDN11-208ENST00000488989 XPNPEP1Q9NQW7 623 aa17.78■□□□□ 0.44
CLDN11-208ENST00000488989 IGKV6-21A0A0C4DH24 114 aa17.77■□□□□ 0.44
CLDN11-208ENST00000488989 MAFO75444 373 aaPredicted RBP17.77■□□□□ 0.44
CLDN11-208ENST00000488989 KRT18P05783 430 aaKnown RBP17.77■□□□□ 0.44
CLDN11-208ENST00000488989 MYL3P08590 195 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms