RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ARHGEF15O94989 841 aa19.7■□□□□ 0.74
ATG3-205ENST00000488910 C22orf31O95567 290 aa19.7■□□□□ 0.74
ATG3-205ENST00000488910 POU3F3P20264 500 aaPredicted RBP19.7■□□□□ 0.74
ATG3-205ENST00000488910 RBM25P49756 843 aaKnown RBP19.7■□□□□ 0.74
ATG3-205ENST00000488910 TMEM62Q0P6H9 643 aa19.7■□□□□ 0.74
ATG3-205ENST00000488910 TRIM29Q14134 588 aa19.7■□□□□ 0.74
ATG3-205ENST00000488910 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.7■□□□□ 0.74
ATG3-205ENST00000488910 ARNTL2Q8WYA1 636 aa19.7■□□□□ 0.74
ATG3-205ENST00000488910 KIF2CQ99661 725 aa19.7■□□□□ 0.74
ATG3-205ENST00000488910 LLPHQ9BRT6 129 aaKnown RBP19.7■□□□□ 0.74
ATG3-205ENST00000488910 FTHL17Q9BXU8 183 aa19.7■□□□□ 0.74
ATG3-205ENST00000488910 AGO3Q9H9G7 860 aaKnown RBP19.7■□□□□ 0.74
ATG3-205ENST00000488910 CERS4Q9HA82 394 aa19.7■□□□□ 0.74
ATG3-205ENST00000488910 SLC37A4O43826 429 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 ZNF862O60290 1169 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 CCNT1O60563 726 aaKnown RBP19.69■□□□□ 0.74
ATG3-205ENST00000488910 OATP04181 439 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 TRMT1LQ7Z2T5 733 aaKnown RBP19.69■□□□□ 0.74
ATG3-205ENST00000488910 ZNF710Q8N1W2 664 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 IL27Q8NEV9 243 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 TNFRSF25Q93038 417 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 TGS1Q96RS0 853 aaKnown RBP19.69■□□□□ 0.74
ATG3-205ENST00000488910 KCNMB3Q9NPA1 279 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 SH2B1Q9NRF2 756 aaPredicted RBP19.69■□□□□ 0.74
ATG3-205ENST00000488910 SIP14410 1827 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 TRANK1O15050 2925 aa19.69■□□□□ 0.74
ATG3-205ENST00000488910 UNC80Q8N2C7 3258 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 LINC01553A4QN01 128 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 GTPBP6O43824 516 aaPredicted RBP19.68■□□□□ 0.74
ATG3-205ENST00000488910 UPP2O95045 317 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 MMP1P03956 469 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 TMOD1P28289 359 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 CD52P31358 61 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 ERVK-21P61565 698 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 PRKCEQ02156 737 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 NR5A1Q13285 461 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 PPP2R5CQ13362 524 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 ODR4Q5SWX8 454 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 METTL13Q8N6R0 699 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 SP7Q8TDD2 431 aaPredicted RBP19.68■□□□□ 0.74
ATG3-205ENST00000488910 YME1L1Q96TA2 773 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 PADI3Q9ULW8 664 aa19.68■□□□□ 0.74
ATG3-205ENST00000488910 RBAK-RBAKDNI3L0D1 243 aa19.67■□□□□ 0.74
ATG3-205ENST00000488910 MARCH6O60337 910 aa19.67■□□□□ 0.74
ATG3-205ENST00000488910 ST3GAL1Q11201 340 aa19.67■□□□□ 0.74
ATG3-205ENST00000488910 PAK2Q13177 524 aa19.67■□□□□ 0.74
ATG3-205ENST00000488910 UGCGQ16739 394 aa19.67■□□□□ 0.74
ATG3-205ENST00000488910 XKR3Q5GH77 459 aa19.67■□□□□ 0.74
ATG3-205ENST00000488910 EARS2Q5JPH6 523 aaKnown RBP19.67■□□□□ 0.74
ATG3-205ENST00000488910 KRT40Q6A162 431 aa19.67■□□□□ 0.74
ATG3-205ENST00000488910 NIFKQ9BYG3 293 aaKnown RBP19.67■□□□□ 0.74
ATG3-205ENST00000488910 LOXHD1Q8IVV2 1947 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 EPOPA6NHQ4 379 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 BTBD18B2RXH4 712 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 RFXAPO00287 272 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 BAG4O95429 457 aaKnown RBP19.66■□□□□ 0.74
ATG3-205ENST00000488910 CRYBB1P53674 252 aaPredicted RBP19.66■□□□□ 0.74
ATG3-205ENST00000488910 EFCAB12Q6NXP0 572 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 CCDC83Q8IWF9 413 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 DIS3L2Q8IYB7 885 aaKnown RBP19.66■□□□□ 0.74
ATG3-205ENST00000488910 SLFN12Q8IYM2 578 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 HAS1Q92839 578 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 SAMD11Q96NU1 681 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 MTCH2Q9Y6C9 303 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 TTC3P53804 2025 aa19.66■□□□□ 0.74
ATG3-205ENST00000488910 DKC1O60832 514 aaKnown RBP eCLIP19.65■□□□□ 0.74
ATG3-205ENST00000488910 PSMC5P62195 406 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 HMGN5P82970 282 aaKnown RBP19.65■□□□□ 0.74
ATG3-205ENST00000488910 RABEP1Q15276 862 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 SAFBQ15424 915 aaKnown RBP eCLIP19.65■□□□□ 0.74
ATG3-205ENST00000488910 TARBP2Q15633 366 aaKnown RBP19.65■□□□□ 0.74
ATG3-205ENST00000488910 LINC01465Q8N7H1 131 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 PPM1EQ8WY54 764 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 MAP7D2Q96T17 732 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 TSPYL2Q9H2G4 693 aaPredicted RBP19.65■□□□□ 0.74
ATG3-205ENST00000488910 UPF2Q9HAU5 1272 aaKnown RBP19.65■□□□□ 0.74
ATG3-205ENST00000488910 CDHR5Q9HBB8 845 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 LMCD1Q9NZU5 365 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 VAV3Q9UKW4 847 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 GINS2Q9Y248 185 aa19.65■□□□□ 0.74
ATG3-205ENST00000488910 FAM205CA6NFA0 338 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 EML1O00423 815 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 GPR182O15218 404 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 GPR32O75388 356 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 RPS6KA5O75582 802 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 STBD1O95210 358 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 TBC1D8BQ0IIM8 1120 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 NFX1Q12986 1120 aaKnown RBP19.64■□□□□ 0.73
ATG3-205ENST00000488910 GRB10Q13322 594 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 CCDC85BQ15834 202 aaPredicted RBP19.64■□□□□ 0.73
ATG3-205ENST00000488910 SPRED2Q7Z698 418 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 RTN4RL1Q86UN2 441 aaPredicted RBP19.64■□□□□ 0.73
ATG3-205ENST00000488910 C8orf76Q96K31 380 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 SUGCTQ9HAC7 445 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 ERVK-5Q9HDB9 667 aa19.64■□□□□ 0.73
ATG3-205ENST00000488910 DDX11L8A8MPP1 907 aa19.63■□□□□ 0.73
ATG3-205ENST00000488910 LPXNO60711 386 aa19.63■□□□□ 0.73
ATG3-205ENST00000488910 VTNP04004 478 aa19.63■□□□□ 0.73
ATG3-205ENST00000488910 P4HBP07237 508 aaKnown RBP19.63■□□□□ 0.73
ATG3-205ENST00000488910 QARSP47897 775 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms