RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 TMX1Q9H3N1 280 aa29.49■■■□□ 2.31
RNF220-216ENST00000488865 MAFBQ9Y5Q3 323 aaPredicted RBP29.49■■■□□ 2.31
RNF220-216ENST00000488865 MRPL42Q9Y6G3 142 aaKnown RBP29.49■■■□□ 2.31
RNF220-216ENST00000488865 ATG2AQ2TAZ0 1938 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 ZBTB42B2RXF5 422 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 ATP4AP20648 1035 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 PSMA5P28066 241 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 CTC1Q2NKJ3 1217 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 TMEM31Q5JXX7 168 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 ODR4Q5SWX8 454 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 BBXQ8WY36 941 aaPredicted RBP29.48■■■□□ 2.31
RNF220-216ENST00000488865 RNF26Q9BY78 433 aaPredicted RBP29.48■■■□□ 2.31
RNF220-216ENST00000488865 CLDND1Q9NY35 253 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 PLAGL2Q9UPG8 496 aa29.48■■■□□ 2.31
RNF220-216ENST00000488865 CIITAP33076 1130 aa29.47■■■□□ 2.31
RNF220-216ENST00000488865 NFX1Q12986 1120 aaKnown RBP29.47■■■□□ 2.31
RNF220-216ENST00000488865 NTRK3Q16288 839 aa29.47■■■□□ 2.31
RNF220-216ENST00000488865 TMEM266Q2M3C6 531 aa29.47■■■□□ 2.31
RNF220-216ENST00000488865 EP400NLQ6ZTU2 488 aa29.47■■■□□ 2.31
RNF220-216ENST00000488865 PHKBQ93100 1093 aa29.47■■■□□ 2.31
RNF220-216ENST00000488865 ERVK-5Q9HDB9 667 aa29.47■■■□□ 2.31
RNF220-216ENST00000488865 TCEAL9Q9UHQ7 104 aa29.47■■■□□ 2.31
RNF220-216ENST00000488865 LRFN2Q9ULH4 789 aa29.47■■■□□ 2.31
RNF220-216ENST00000488865 GPR37L1O60883 481 aa29.46■■■□□ 2.31
RNF220-216ENST00000488865 RPS6KA5O75582 802 aa29.46■■■□□ 2.31
RNF220-216ENST00000488865 REC8O95072 547 aa29.46■■■□□ 2.31
RNF220-216ENST00000488865 SARSP49591 514 aaKnown RBP29.46■■■□□ 2.31
RNF220-216ENST00000488865 CKAP2LQ8IYA6 745 aa29.46■■■□□ 2.31
RNF220-216ENST00000488865 CCDC148Q8NFR7 591 aa29.46■■■□□ 2.31
RNF220-216ENST00000488865 UIMC1Q96RL1 719 aa29.46■■■□□ 2.31
RNF220-216ENST00000488865 RNF216Q9NWF9 866 aaPredicted RBP29.46■■■□□ 2.31
RNF220-216ENST00000488865 GINS2Q9Y248 185 aa29.46■■■□□ 2.31
RNF220-216ENST00000488865 NOC2LQ9Y3T9 749 aaKnown RBP29.46■■■□□ 2.31
RNF220-216ENST00000488865 PCDHA10Q9Y5I2 948 aa29.46■■■□□ 2.31
RNF220-216ENST00000488865 MYH9P35579 1960 aaKnown RBP29.45■■■□□ 2.31
RNF220-216ENST00000488865 PSAPP07602 524 aa29.45■■■□□ 2.31
RNF220-216ENST00000488865 IFNAR1P17181 557 aa29.45■■■□□ 2.31
RNF220-216ENST00000488865 SSTR3P32745 418 aaPredicted RBP29.45■■■□□ 2.31
RNF220-216ENST00000488865 LTBRP36941 435 aa29.45■■■□□ 2.31
RNF220-216ENST00000488865 EVCP57679 992 aa29.45■■■□□ 2.31
RNF220-216ENST00000488865 HYAL1Q12794 435 aa29.45■■■□□ 2.31
RNF220-216ENST00000488865 PRR16Q569H4 304 aa29.45■■■□□ 2.31
RNF220-216ENST00000488865 CDHR5Q9HBB8 845 aa29.45■■■□□ 2.31
RNF220-216ENST00000488865 ALG13Q9NP73 1137 aaKnown RBP29.45■■■□□ 2.31
RNF220-216ENST00000488865 PRKAG3Q9UGI9 489 aa29.45■■■□□ 2.31
RNF220-216ENST00000488865 EVPLQ92817 2033 aa29.45■■■□□ 2.3
RNF220-216ENST00000488865 GPR182O15218 404 aa29.44■■■□□ 2.3
RNF220-216ENST00000488865 C22orf31O95567 290 aa29.44■■■□□ 2.3
RNF220-216ENST00000488865 CAMK1Q14012 370 aa29.44■■■□□ 2.3
RNF220-216ENST00000488865 TMEM40Q8WWA1 233 aa29.44■■■□□ 2.3
RNF220-216ENST00000488865 C1orf112Q9NSG2 853 aa29.44■■■□□ 2.3
RNF220-216ENST00000488865 CEP131Q9UPN4 1083 aa29.44■■■□□ 2.3
RNF220-216ENST00000488865 PCDHB7Q9Y5E2 793 aa29.44■■■□□ 2.3
RNF220-216ENST00000488865 CRYBB1P53674 252 aaPredicted RBP29.43■■■□□ 2.3
RNF220-216ENST00000488865 PAN2Q504Q3 1202 aaKnown RBP29.43■■■□□ 2.3
RNF220-216ENST00000488865 RASGRP4Q8TDF6 673 aa29.43■■■□□ 2.3
RNF220-216ENST00000488865 LENG9Q96B70 501 aa29.43■■■□□ 2.3
RNF220-216ENST00000488865 SLC26A6Q9BXS9 759 aa29.43■■■□□ 2.3
RNF220-216ENST00000488865 C11orf16Q9NQ32 467 aa29.43■■■□□ 2.3
RNF220-216ENST00000488865 RGS18Q9NS28 235 aa29.43■■■□□ 2.3
RNF220-216ENST00000488865 ST3GAL5Q9UNP4 418 aa29.43■■■□□ 2.3
RNF220-216ENST00000488865 KIAA1671Q9BY89 1806 aa29.43■■■□□ 2.3
RNF220-216ENST00000488865 ITGB1P05556 798 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 PDIA3P30101 505 aaKnown RBP29.42■■■□□ 2.3
RNF220-216ENST00000488865 SLC24A5Q71RS6 500 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 KLHL23Q8NBE8 558 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 SPPL3Q8TCT6 385 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 PPP2R3CQ969Q6 453 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 CCDC136Q96JN2 1154 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 FAM167AQ96KS9 214 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 ADAM2Q99965 735 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 SH3GLB2Q9NR46 395 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 GABBR1Q9UBS5 961 aa29.42■■■□□ 2.3
RNF220-216ENST00000488865 DENND3A2RUS2 1198 aa29.41■■■□□ 2.3
RNF220-216ENST00000488865 MAGEB2O15479 319 aa29.41■■■□□ 2.3
RNF220-216ENST00000488865 EPB41L2O43491 1005 aaKnown RBP29.41■■■□□ 2.3
RNF220-216ENST00000488865 MGEA5O60502 916 aa29.41■■■□□ 2.3
RNF220-216ENST00000488865 GATMP50440 423 aa29.41■■■□□ 2.3
RNF220-216ENST00000488865 USP11P51784 963 aa29.41■■■□□ 2.3
RNF220-216ENST00000488865 METTL13Q8N6R0 699 aa29.41■■■□□ 2.3
RNF220-216ENST00000488865 VPS54Q9P1Q0 977 aa29.41■■■□□ 2.3
RNF220-216ENST00000488865 ARIH1Q9Y4X5 557 aaPredicted RBP29.41■■■□□ 2.3
RNF220-216ENST00000488865 SAMM50Q9Y512 469 aa29.41■■■□□ 2.3
RNF220-216ENST00000488865 WDR64B1ANS9 1081 aa29.4■■■□□ 2.3
RNF220-216ENST00000488865 GPR32O75388 356 aa29.4■■■□□ 2.3
RNF220-216ENST00000488865 KIZQ2M2Z5 673 aa29.4■■■□□ 2.3
RNF220-216ENST00000488865 C9IYK1 514 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 EDIL3O43854 480 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 ALADP13716 330 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 DNAJB1P25685 340 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 PLA2G5P39877 138 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 CCT2P78371 535 aaKnown RBP29.39■■■□□ 2.3
RNF220-216ENST00000488865 ZP2Q05996 745 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 DLX2Q07687 328 aaPredicted RBP29.39■■■□□ 2.3
RNF220-216ENST00000488865 RUFY3Q7L099 469 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 FAM228AQ86W67 206 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 ZNF710Q8N1W2 664 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 RIT2Q99578 217 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 OSMRQ99650 979 aa29.39■■■□□ 2.3
RNF220-216ENST00000488865 HCN4Q9Y3Q4 1203 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms