RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 PHF20Q9BVI0 1012 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 LMO7Q8WWI1 1683 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 NMT2O60551 498 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 CBX6O95503 412 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 TPBGLP0DKB5 382 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 CALB2P22676 271 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 PDE6CP51160 858 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 MTMR3Q13615 1198 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 NAB2Q15742 525 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 CERKLQ49MI3 558 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-229ENST00000488765 GIMAP8Q8ND71 665 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-229ENST00000488765 PIGOQ8TEQ8 1089 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 BAP1Q92560 729 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 DYDC2Q96IM9 177 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 STRBPQ96SI9 672 aaKnown RBP17.53■□□□□ 0.4
MCF2L-229ENST00000488765 MYH1P12882 1939 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 KRT13P13646 458 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 CCNE1P24864 410 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 YIPF2Q9BWQ6 316 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 RNPEPL1Q9HAU8 725 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 TSKSQ9UJT2 592 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 GPR75-ASB3A0A0A6YYF3 556 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-229ENST00000488765 CREB3O43889 395 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 PEX11AO75192 247 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 ACSL3O95573 720 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 ATP6V1C1P21283 382 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 KCNA3P22001 575 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 YY1P25490 414 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 MMP13P45452 471 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 PMS2P54278 862 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 KLHL30Q0D2K2 578 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 DBN1Q16643 649 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 C1orf131Q8NDD1 294 aaKnown RBP17.52■□□□□ 0.4
MCF2L-229ENST00000488765 ERP27Q96DN0 273 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 ERGIC2Q96RQ1 377 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 NSRP1Q9H0G5 558 aaKnown RBP17.52■□□□□ 0.4
MCF2L-229ENST00000488765 PTPN22Q9Y2R2 807 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 ASB3Q9Y575 518 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 TNKSO95271 1327 aa17.52■□□□□ 0.4
MCF2L-229ENST00000488765 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.39
MCF2L-229ENST00000488765 PFDN1O60925 122 aa17.52■□□□□ 0.39
MCF2L-229ENST00000488765 SFMBT2Q5VUG0 894 aa17.52■□□□□ 0.39
MCF2L-229ENST00000488765 SUSD4Q5VX71 490 aa17.52■□□□□ 0.39
MCF2L-229ENST00000488765 ABTB1Q969K4 478 aaPredicted RBP17.52■□□□□ 0.39
MCF2L-229ENST00000488765 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.39
MCF2L-229ENST00000488765 TRPM3Q9HCF6 1732 aaPredicted RBP17.52■□□□□ 0.39
MCF2L-229ENST00000488765 LMTK3Q96Q04 1460 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 HNRNPRO43390 633 aaKnown RBP17.51■□□□□ 0.39
MCF2L-229ENST00000488765 ATP9AO75110 1047 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 GNAZP19086 355 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 CACNA2D1P54289 1103 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 EVX2Q03828 476 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 PEX26Q7Z412 305 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 TEX9Q8N6V9 391 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 FAM13CQ8NE31 585 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 PLEKHG4BQ96PX9 1271 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 TSPYL2Q9H2G4 693 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-229ENST00000488765 NWD2Q9ULI1 1742 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 ZNF142P52746 1687 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-229ENST00000488765 TMEM120BA0PK00 339 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 LIN7AO14910 233 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-229ENST00000488765 PCCAP05165 728 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-229ENST00000488765 ACTN1P12814 892 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 PLCG1P19174 1290 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 CTSWP56202 376 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 MCL1Q07820 350 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 MYBPC3Q14896 1274 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-229ENST00000488765 CNGA2Q16280 664 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 FAM83BQ5T0W9 1011 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 PDXDC1Q6P996 788 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 HOOK3Q86VS8 718 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 GBP5Q96PP8 586 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 ANKIB1Q9P2G1 1089 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 SCOCQ9UIL1 159 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 LRRC42Q9Y546 428 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 BCAMP50895 628 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 DTHD1Q6ZMT9 781 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 STK32AQ8WU08 396 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 RNF14Q9UBS8 474 aa17.51■□□□□ 0.39
MCF2L-229ENST00000488765 ASTE1Q2TB18 679 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-229ENST00000488765 OR52E8Q6IFG1 317 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 NEK9Q8TD19 979 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 SCFD2Q8WU76 684 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 NGLY1Q96IV0 654 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 NMRK1Q9NWW6 199 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 CHORDC1Q9UHD1 332 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-229ENST00000488765 BLOC1S6Q9UL45 172 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 NPTXRO95502 500 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 MYBP10242 640 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
MCF2L-229ENST00000488765 INF2Q27J81 1249 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 GALNTL6Q49A17 601 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 RFWD3Q6PCD5 774 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 ARHGEF2Q92974 986 aaKnown RBP17.5■□□□□ 0.39
MCF2L-229ENST00000488765 KRT23Q9C075 422 aa17.5■□□□□ 0.39
MCF2L-229ENST00000488765 EPB41L4BQ9H329 900 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms