RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 CNKSR2Q8WXI2 1034 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 BAP1Q92560 729 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 SYN2Q92777 582 aaPredicted RBP7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 CDHR1Q96JP9 859 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 WDR24Q96S15 920 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 EIF3CQ99613 913 aaKnown RBP7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 TIPINQ9BVW5 301 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 MMRN2Q9H8L6 949 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 NHEJ1Q9H9Q4 299 aaPredicted RBP7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 METTL14Q9HCE5 456 aaKnown RBP7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 BTBD7Q9P203 1132 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 PCDHA10Q9Y5I2 948 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 NFASCO94856 1347 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 UBE4BO95155 1302 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 DOCK1Q14185 1865 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 SMCHD1A6NHR9 2005 aa7.42□□□□□ -1.22
RN7SL561P-201ENST00000488553 A0A0G2JLL6 359 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 TESPA1A2RU30 521 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 KIF5CO60282 957 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 EIF3JO75822 258 aaKnown RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ABL1P00519 1130 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 PLS3P13797 630 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 YWHABP31946 246 aaKnown RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 EPHX2P34913 555 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 MCCD1P59942 119 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 HERVK_113P62684 666 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 KRT83P78385 493 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 KCNH2Q12809 1159 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 MYBPC2Q14324 1141 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 UGCGQ16739 394 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 PDXDC1Q6P996 788 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 RRAGAQ7L523 313 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 PRRT2Q7Z6L0 340 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 SLC9A9Q8IVB4 645 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 FAM178BQ8IXR5 827 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 SMAP1Q8IYB5 467 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ANKRD13AQ8IZ07 590 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ZNF710Q8N1W2 664 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 CDCA5Q96FF9 252 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ERO1AQ96HE7 468 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 CLMNQ96JQ2 1002 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 IRX2Q9BZI1 471 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 NUCKS1Q9H1E3 243 aaKnown RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 IKZF4Q9H2S9 585 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ST6GALNAC4Q9H4F1 302 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 LZTFL1Q9NQ48 299 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 PLCB1Q9NQ66 1216 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 FAM207AQ9NSI2 230 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 CEP72Q9P209 647 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 MYO1AQ9UBC5 1043 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ARMCX3Q9UH62 379 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 FBXO40Q9UH90 709 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ZNF215Q9UL58 517 aaPredicted RBP7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 KCNH4Q9UQ05 1017 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 SAMM50Q9Y512 469 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 ZMYM2Q9UBW7 1377 aa7.41□□□□□ -1.22
RN7SL561P-201ENST00000488553 RLFQ13129 1914 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 SOWAHBA6NEL2 793 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 SPDYE5A6NIY4 337 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 LRRC53A6NM62 1247 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 BACH1O14867 736 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 CLIC2O15247 247 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 DKC1O60832 514 aaKnown RBP eCLIP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 CNMDO75829 334 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 URI1O94763 535 aaPredicted RBP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 ATG7O95352 703 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 LCA5LO95447 670 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 AFPP02771 609 aaKnown RBP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 PSAPP07602 524 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 ERCC3P19447 782 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 NF2P35240 595 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 CYLC1P35663 651 aaPredicted RBP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 PSMC2P35998 433 aaKnown RBP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 CASP4P49662 377 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 SNRPFP62306 86 aaKnown RBP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 RBM10P98175 930 aaKnown RBP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 GTF2BQ00403 316 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 CNTN2Q02246 1040 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 PPIL2Q13356 520 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 MAPK8IP2Q13387 824 aaPredicted RBP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 MOGSQ13724 837 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 ALCAMQ13740 583 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 TUBB2AQ13885 445 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 PLS1Q14651 629 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 STXBP2Q15833 593 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 ASTE1Q2TB18 679 aaPredicted RBP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 LDLRAD1Q5T700 205 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 SWSAP1Q6NVH7 229 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 ABHD15Q6UXT9 468 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 GADL1Q6ZQY3 521 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 MOB2Q70IA6 237 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 ANO5Q75V66 913 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 OTUD6AQ7L8S5 288 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 KSR1Q8IVT5 923 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 C12orf56Q8IXR9 622 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 SLC17A8Q8NDX2 589 aa7.4□□□□□ -1.22
RN7SL561P-201ENST00000488553 GOLGA5Q8TBA6 731 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms