RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 SMARCE1Q969G3 411 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 LENG9Q96B70 501 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 PDCD2LQ9BRP1 358 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 NAT10Q9H0A0 1025 aaKnown RBP13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 RBSNQ9H1K0 784 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 UBE2ZQ9H832 354 aaPredicted RBP13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 A1CFQ9NQ94 594 aaKnown RBP13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 CYP39A1Q9NYL5 469 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 ZFHX2Q9C0A1 2572 aaPredicted RBP13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 POTEMA6NI47 508 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 MSH4O15457 936 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 LPXNO60711 386 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 STAM2O75886 525 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 EIF2AK2P19525 551 aaKnown RBP13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 CST5P28325 142 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 DEKP35659 375 aaKnown RBP13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 AMPD3Q01432 767 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 PNOCQ13519 176 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 LEXMQ3ZCV2 418 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 PDXDC2PQ6P474 469 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 NLRX1Q86UT6 975 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 PCSK9Q8NBP7 692 aaKnown RBP13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 PRSS33Q8NF86 280 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 DNERQ8NFT8 737 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 FAM200AQ8TCP9 573 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 SLC5A5Q92911 643 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 PAGE5Q96GU1 130 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 MFSD14AQ96MC6 490 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 MPHOSPH6Q99547 160 aaKnown RBP13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 WDR11Q9BZH6 1224 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 LRRC27Q9C0I9 530 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 FAM184BQ9ULE4 1060 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 UBIAD1Q9Y5Z9 338 aa13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
HLA-DOB-209ENST00000488325 GAS7O60861 476 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 DUSP11O75319 330 aaKnown RBP13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 C6orf222P0C671 652 aaPredicted RBP13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 MYCLP12524 364 aaPredicted RBP13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 PLCG1P19174 1290 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 CDC25AP30304 524 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 CCT6AP40227 531 aaKnown RBP13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 SEMA3FQ13275 785 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 ZNF792Q3KQV3 632 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 ANO6Q4KMQ2 910 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 RPUSD2Q8IZ73 545 aaKnown RBP13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 KCTD17Q8N5Z5 321 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 VWCEQ96DN2 955 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 IWS1Q96ST2 819 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 MMP19Q99542 508 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 RIT2Q99578 217 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 ZNF577Q9BSK1 485 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 WNT8AQ9H1J5 351 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 JADE2Q9NQC1 790 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 TCEAL9Q9UHQ7 104 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 DACH1Q9UI36 760 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 DIS3Q9Y2L1 958 aaKnown RBP13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 TRIOO75962 3097 aa13.46□□□□□ -0.25
HLA-DOB-209ENST00000488325 COL4A4P53420 1690 aaPredicted RBP13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 MAFGO15525 162 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 GFRA3O60609 400 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 NR3C2P08235 984 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 KCNA5P22460 613 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 AFMP43652 599 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 PTPN5P54829 565 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 PPP2R5CQ13362 524 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 TTLL4Q14679 1199 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 TMEM119Q4V9L6 283 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 HYIQ5T013 277 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 NT5DC1Q5TFE4 455 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 NCAPH2Q6IBW4 605 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 PTCRAQ6ISU1 281 aaPredicted RBP13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 VSIG10LQ86VR7 867 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 RNF214Q8ND24 703 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 IL31RAQ8NI17 732 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 CYP2W1Q8TAV3 490 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 GPRASP2Q96D09 838 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 CDHR1Q96JP9 859 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 GSDMAQ96QA5 445 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 NOC4LQ9BVI4 516 aaKnown RBP13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 GTPBP4Q9BZE4 634 aaKnown RBP13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 RMND1Q9NWS8 449 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
HLA-DOB-209ENST00000488325 IPO5O00410 1097 aaKnown RBP13.44□□□□□ -0.26
HLA-DOB-209ENST00000488325 PSMD10O75832 226 aa13.44□□□□□ -0.26
HLA-DOB-209ENST00000488325 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
HLA-DOB-209ENST00000488325 ARP10275 920 aa13.44□□□□□ -0.26
HLA-DOB-209ENST00000488325 ITGB5P18084 799 aa13.44□□□□□ -0.26
HLA-DOB-209ENST00000488325 MUTP22033 750 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms