RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 PLCD3Q8N3E9 789 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 MRPL43Q8N983 215 aaKnown RBP6.85□□□□□ -1.31
COL4A3-206ENST00000487633 PJA1Q8NG27 643 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 BBC3Q96PG8 261 aaPredicted RBP6.85□□□□□ -1.31
COL4A3-206ENST00000487633 VN1R3Q9BXE9 311 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 FAM49AQ9H0Q0 323 aaPredicted RBP6.85□□□□□ -1.31
COL4A3-206ENST00000487633 EPC1Q9H2F5 836 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 MLXIPQ9HAP2 919 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 USTQ9Y2C2 406 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 PCDHB12Q9Y5F1 795 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 MAST4O15021 2626 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 ITPR1Q14643 2758 aa6.85□□□□□ -1.31
COL4A3-206ENST00000487633 MTCL1Q9Y4B5 1905 aaKnown RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 MBLAC1A4D2B0 266 aaPredicted RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 PATL2C9JE40 543 aaKnown RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 TAF4O00268 1085 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 CFBP00751 764 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 SNHG28P0DPA3 235 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 TDGF1P13385 188 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 SARSP49591 514 aaKnown RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 IGBP1P78318 339 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 MRPS6P82932 125 aaKnown RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 MRPS9P82933 396 aaKnown RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 SRSF5Q13243 272 aaKnown RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 FZD5Q13467 585 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 CDC37Q16543 378 aaPredicted RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 SLC35G1Q2M3R5 365 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 QRICH1Q2TAL8 776 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 TPRNQ4KMQ1 711 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 ATAT1Q5SQI0 421 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 VPS53Q5VIR6 699 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 XRRA1Q6P2D8 792 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 KCNT2Q6UVM3 1135 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 UNQ6494/PRO21346Q6UXR6 183 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 GPR149Q86SP6 731 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 VSIG10LQ86VR7 867 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 RGS22Q8NE09 1264 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 APPBP2Q92624 585 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 CASD1Q96PB1 797 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 IWS1Q96ST2 819 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 PPP1R16BQ96T49 567 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 ARHGEF3Q9NR81 526 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 RTEL1Q9NZ71 1219 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 LHX6Q9UPM6 363 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 WASF3Q9UPY6 502 aa6.84□□□□□ -1.31
COL4A3-206ENST00000487633 NOC2LQ9Y3T9 749 aaKnown RBP6.84□□□□□ -1.31
COL4A3-206ENST00000487633 IGSF9BQ9UPX0 1349 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 EML5Q05BV3 1969 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 C9IYK1 514 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 GIPC1O14908 333 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 B4GALT3O60512 393 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 RANBP6O60518 1105 aaKnown RBP6.83□□□□□ -1.32
COL4A3-206ENST00000487633 ATP9AO75110 1047 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 IFIT2P09913 472 aaKnown RBP6.83□□□□□ -1.32
COL4A3-206ENST00000487633 SDHBP21912 280 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 CA8P35219 290 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 HSD17B4P51659 736 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 NFX1Q12986 1120 aaKnown RBP6.83□□□□□ -1.32
COL4A3-206ENST00000487633 SNW1Q13573 536 aaKnown RBP6.83□□□□□ -1.32
COL4A3-206ENST00000487633 GRIK4Q16099 956 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 PHLDB3Q6NSJ2 640 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 ADGRF4Q8IZF3 695 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 SLC39A11Q8N1S5 342 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 KDF1Q8NAX2 398 aaPredicted RBP6.83□□□□□ -1.32
COL4A3-206ENST00000487633 NETO1Q8TDF5 533 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 PCYT2Q99447 389 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 MPHOSPH6Q99547 160 aaKnown RBP6.83□□□□□ -1.32
COL4A3-206ENST00000487633 ADAM2Q99965 735 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 ZKSCAN3Q9BRR0 538 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 NGRNQ9NPE2 291 aaKnown RBP6.83□□□□□ -1.32
COL4A3-206ENST00000487633 SEMA4GQ9NTN9 838 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 SPATA6Q9NWH7 488 aaPredicted RBP6.83□□□□□ -1.32
COL4A3-206ENST00000487633 TUBE1Q9UJT0 475 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 LRFN2Q9ULH4 789 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 LZTS1Q9Y250 596 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 PCDHB7Q9Y5E2 793 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 NAV2Q8IVL1 2488 aa6.83□□□□□ -1.32
COL4A3-206ENST00000487633 HELZ2Q9BYK8 2649 aaKnown RBP6.82□□□□□ -1.32
COL4A3-206ENST00000487633 CCDC171Q6TFL3 1326 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 NRCAMQ92823 1304 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 GSTTP1A0A1W2PQM5 241 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 SPTLC1O15269 473 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 RNF113AO15541 343 aaKnown RBP6.82□□□□□ -1.32
COL4A3-206ENST00000487633 CXCL14O95715 111 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 STAG3L1P0CL83 205 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 SRGAP2BP0DMP2 458 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 TOP1P11387 765 aaKnown RBP6.82□□□□□ -1.32
COL4A3-206ENST00000487633 SRFP11831 508 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 METAP2P50579 478 aaKnown RBP eCLIP6.82□□□□□ -1.32
COL4A3-206ENST00000487633 STARD6P59095 220 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 GPC5P78333 572 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 PPFIA1Q13136 1202 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 SMC1AQ14683 1233 aaKnown RBP6.82□□□□□ -1.32
COL4A3-206ENST00000487633 PTPN14Q15678 1187 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 LETM2Q2VYF4 491 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 ZNF528Q3MIS6 628 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 CLLU1OSQ5K130 101 aa6.82□□□□□ -1.32
COL4A3-206ENST00000487633 PDE12Q6L8Q7 609 aaKnown RBP6.82□□□□□ -1.32
COL4A3-206ENST00000487633 DCLRE1AQ6PJP8 1040 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms