RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 GLE1Q53GS7 698 aaKnown RBP12.81□□□□□ -0.36
TRA2B-214ENST00000487615 CENPPQ6IPU0 288 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 MOXD1Q6UVY6 613 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 FAM81BQ96LP2 452 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 BCL9LQ86UU0 1499 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 DISP2A7MBM2 1401 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-214ENST00000487615 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-214ENST00000487615 YWHAEP62258 255 aaKnown RBP12.81□□□□□ -0.36
TRA2B-214ENST00000487615 ZRSR2Q15696 482 aaKnown RBP12.81□□□□□ -0.36
TRA2B-214ENST00000487615 DCPSQ96C86 337 aaKnown RBP12.81□□□□□ -0.36
TRA2B-214ENST00000487615 DNAJC7Q99615 494 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 PLAGL2Q9UPG8 496 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 GINS2Q9Y248 185 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 MYO1FO00160 1098 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 CATSPER3Q86XQ3 398 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 MAGOHBQ96A72 148 aaKnown RBP12.81□□□□□ -0.36
TRA2B-214ENST00000487615 CAPS2Q9BXY5 557 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 PLCB1Q9NQ66 1216 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 SAMD15Q9P1V8 674 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 SNX12Q9UMY4 172 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 C5P01031 1676 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 DCAF8L1A6NGE4 600 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 FDX1P10109 184 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 SFNP31947 248 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 RHOT2Q8IXI1 618 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 WRNIP1Q96S55 665 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 FAM114A2Q9NRY5 505 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 PSMD14O00487 310 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 SLC16A3O15427 465 aaKnown RBP12.8□□□□□ -0.36
TRA2B-214ENST00000487615 NCK2O43639 380 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 CYP11B2P19099 503 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 ATP1A2P50993 1020 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 MRPS25P82663 173 aaKnown RBP12.8□□□□□ -0.36
TRA2B-214ENST00000487615 RASA3Q14644 834 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 SLC18A3Q16572 532 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 KCTD17Q8N5Z5 321 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 MCPH1Q8NEM0 835 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 PRMT6Q96LA8 375 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-214ENST00000487615 ODF2LQ9ULJ1 636 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 DAAM1Q9Y4D1 1078 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 CCDC188H7C350 402 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 GCLMP48507 274 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 VSNL1P62760 191 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 SNRNP48Q6IEG0 339 aaKnown RBP12.8□□□□□ -0.36
TRA2B-214ENST00000487615 ZNF408Q9H9D4 720 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 HIP1RO75146 1068 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 TMEM191BP0C7N4 346 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 HSPA6P17066 643 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 PMS1P54277 932 aaKnown RBP12.8□□□□□ -0.36
TRA2B-214ENST00000487615 DRAP1Q14919 205 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-214ENST00000487615 FIGNQ5HY92 759 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.8□□□□□ -0.36
TRA2B-214ENST00000487615 LPAR1Q92633 364 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 MAK16Q9BXY0 300 aaKnown RBP12.8□□□□□ -0.36
TRA2B-214ENST00000487615 LRRC4BQ9NT99 713 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 NKIRAS1Q9NYS0 192 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
TRA2B-214ENST00000487615 TRPM3Q9HCF6 1732 aaPredicted RBP12.79□□□□□ -0.36
TRA2B-214ENST00000487615 SLC16A4O15374 487 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 TRIM49P0CI25 452 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 TRIM49CP0CI26 452 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 NSUN6Q8TEA1 469 aaKnown RBP12.79□□□□□ -0.36
TRA2B-214ENST00000487615 WHAMMQ8TF30 809 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 GMCL1Q96IK5 515 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 MMS19Q96T76 1030 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 SEMA6BQ9H3T3 888 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 NID2Q14112 1375 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
TRA2B-214ENST00000487615 EZRP15311 586 aaKnown RBP12.79□□□□□ -0.36
TRA2B-214ENST00000487615 ATP2A2P16615 1042 aaKnown RBP12.79□□□□□ -0.36
TRA2B-214ENST00000487615 GBP1P32455 592 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 PSMC5P62195 406 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 KCTD16Q68DU8 428 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 TAOK1Q7L7X3 1001 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 SYT2Q8N9I0 419 aaPredicted RBP12.79□□□□□ -0.36
TRA2B-214ENST00000487615 TRIM11Q96F44 468 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 IQCGQ9H095 443 aaKnown RBP12.79□□□□□ -0.36
TRA2B-214ENST00000487615 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 KCND1Q9NSA2 647 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 TACC3Q9Y6A5 838 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 MYBP10242 640 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 UCHL3P15374 230 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 VAMP7P51809 220 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 SPATA4Q8NEY3 305 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 BCAS4Q8TDM0 211 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 AP1M1Q9BXS5 423 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 ADAM21Q9UKJ8 722 aa12.79□□□□□ -0.36
TRA2B-214ENST00000487615 PASKQ96RG2 1323 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 ZNF233A6NK53 670 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 MSH4O15457 936 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 TNNC2P02585 160 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
TRA2B-214ENST00000487615 PPARDQ03181 441 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 KCTD2Q14681 263 aa12.78□□□□□ -0.36
TRA2B-214ENST00000487615 CRY2Q49AN0 593 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms