RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 TRMT13Q9NUP7 481 aaKnown RBP12.01□□□□□ -0.49
TOP3B-216ENST00000487485 TFIP11Q9UBB9 837 aaKnown RBP12.01□□□□□ -0.49
TOP3B-216ENST00000487485 SCN10AQ9Y5Y9 1956 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 KAT6AQ92794 2004 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 IGKV6D-21A0A0A0MT36 114 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 EML1O00423 815 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 BACH1O14867 736 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 GTPBP6O43824 516 aaPredicted RBP12□□□□□ -0.49
TOP3B-216ENST00000487485 LGR5O75473 907 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 F2P00734 622 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 PSEN2P49810 448 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 STAT5BP51692 787 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 CHMP4BP1P59074 171 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 MFSD10Q14728 455 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 PTPAQ15257 358 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 IL17AQ16552 155 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 TMEM266Q2M3C6 531 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 TMEM31Q5JXX7 168 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 TRIM50Q86XT4 487 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 CCDC60Q8IWA6 550 aaPredicted RBP12□□□□□ -0.49
TOP3B-216ENST00000487485 ARNTL2Q8WYA1 636 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 KATNAL1Q9BW62 490 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 SEZ6LQ9BYH1 1024 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 ZNF302Q9NR11 478 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 ERAP1Q9NZ08 941 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 GABBR1Q9UBS5 961 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 ZNF215Q9UL58 517 aaPredicted RBP12□□□□□ -0.49
TOP3B-216ENST00000487485 ARIH1Q9Y4X5 557 aaPredicted RBP12□□□□□ -0.49
TOP3B-216ENST00000487485 EMSYQ7Z589 1322 aa12□□□□□ -0.49
TOP3B-216ENST00000487485 TRIP12Q14669 1992 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-216ENST00000487485 POTEMA6NI47 508 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 HAS3O00219 553 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.49
TOP3B-216ENST00000487485 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
TOP3B-216ENST00000487485 PDIA5Q14554 519 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 SLC39A14Q15043 492 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 EPHA7Q15375 998 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 KIAA0753Q2KHM9 967 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 NBPF20Q3BBV1 942 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 FAM160B1Q5W0V3 765 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 ARL6IP4Q66PJ3 421 aaKnown RBP11.99□□□□□ -0.49
TOP3B-216ENST00000487485 ATL3Q6DD88 541 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 PLPPR4Q7Z2D5 763 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 SPRED2Q7Z698 418 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 AFAP1L1Q8TED9 768 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 PPP1R13LQ8WUF5 828 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 C11orf16Q9NQ32 467 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 CFAP45Q9UL16 551 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-216ENST00000487485 COG5Q9UP83 839 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 HCN4Q9Y3Q4 1203 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 ATP6V1DQ9Y5K8 247 aa11.99□□□□□ -0.49
TOP3B-216ENST00000487485 MAFBQ9Y5Q3 323 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-216ENST00000487485 MYO7AQ13402 2215 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 VWA3AA6NCI4 1184 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 FAM86C2PA6NEL3 165 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 P4HBP07237 508 aaKnown RBP11.98□□□□□ -0.49
TOP3B-216ENST00000487485 MARK3P27448 753 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 MARCKSP29966 332 aaPredicted RBP11.98□□□□□ -0.49
TOP3B-216ENST00000487485 NASPP49321 788 aaPredicted RBP11.98□□□□□ -0.49
TOP3B-216ENST00000487485 TAP1Q03518 808 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 STK38Q15208 465 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 PDXDC2PQ6P474 469 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 C7orf31Q8N865 590 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 IGSF22Q8N9C0 903 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 LINC00301Q8NCQ3 95 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 BANK1Q8NDB2 785 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 HLA-CQ95604 372 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 DYDC2Q96IM9 177 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 RAB34Q9BZG1 259 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 RNPEPQ9H4A4 650 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 CD320Q9NPF0 282 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 CHMP5Q9NZZ3 219 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 LRWD1Q9UFC0 647 aa11.98□□□□□ -0.49
TOP3B-216ENST00000487485 IGSF9BQ9UPX0 1349 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 GPR37L1O60883 481 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 SLITRK3O94933 977 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 YEATS4O95619 227 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 PFKMP08237 780 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 ATP4AP20648 1035 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 QARSP47897 775 aaKnown RBP11.97□□□□□ -0.49
TOP3B-216ENST00000487485 SLC26A2P50443 739 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 PSMC5P62195 406 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 GRB10Q13322 594 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 PLCB4Q15147 1175 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 UGCGQ16739 394 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 FAM47CQ5HY64 1035 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 NFRKBQ6P4R8 1299 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 TRMT1LQ7Z2T5 733 aaKnown RBP11.97□□□□□ -0.49
TOP3B-216ENST00000487485 CKAP2LQ8IYA6 745 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 ATP6V0A1Q93050 837 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 CHAMP1Q96JM3 812 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 HSD17B14Q9BPX1 270 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 EIF2AK1Q9BQI3 630 aaKnown RBP11.97□□□□□ -0.49
TOP3B-216ENST00000487485 RGL1Q9NZL6 768 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 HDAC6Q9UBN7 1215 aa11.97□□□□□ -0.49
TOP3B-216ENST00000487485 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 SPTLC2O15270 562 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 ZNF862O60290 1169 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 LPXNO60711 386 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms