RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 STAG3L1P0CL83 205 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 PSMA5P28066 241 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 CIITAP33076 1130 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 LTBRP36941 435 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 GATMP50440 423 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 EVCP57679 992 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 NFX1Q12986 1120 aaKnown RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 CAMK1Q14012 370 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 PAN2Q504Q3 1202 aaKnown RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 ZNF746Q6NUN9 644 aaPredicted RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 TRMT1LQ7Z2T5 733 aaKnown RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 TMEM40Q8WWA1 233 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 LENG9Q96B70 501 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 CCDC136Q96JN2 1154 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 LRFN3Q9BTN0 628 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 PLVAPQ9BX97 442 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 SLC26A6Q9BXS9 759 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 RNF26Q9BY78 433 aaPredicted RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
VPS16-208ENST00000487461 ERVK-5Q9HDB9 667 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 VPS54Q9P1Q0 977 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 PCDHA10Q9Y5I2 948 aa13.84□□□□□ -0.19
VPS16-208ENST00000487461 PI4K2BG5E9Z4 385 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 RPS6KA5O75582 802 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 C22orf31O95567 290 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 PSAPP07602 524 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 IFNAR1P17181 557 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 DNAJB1P25685 340 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 SETQ01105 290 aaPredicted RBP13.83□□□□□ -0.2
VPS16-208ENST00000487461 HYAL1Q12794 435 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 CTC1Q2NKJ3 1217 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 PUS10Q3MIT2 529 aaKnown RBP13.83□□□□□ -0.2
VPS16-208ENST00000487461 CKAP2LQ8IYA6 745 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 GJD3Q8N144 294 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 SPPL3Q8TCT6 385 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 BBXQ8WY36 941 aaPredicted RBP13.83□□□□□ -0.2
VPS16-208ENST00000487461 PPP1R16BQ96T49 567 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 CLDND1Q9NY35 253 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 GABBR1Q9UBS5 961 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 ST3GAL5Q9UNP4 418 aa13.83□□□□□ -0.2
VPS16-208ENST00000487461 NLRC5Q86WI3 1866 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 NCK2O43639 380 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 GPR32O75388 356 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 REC8O95072 547 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 CSPG5O95196 566 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 MMP1P03956 469 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 ITGB1P05556 798 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 IBSPP21815 317 aaPredicted RBP13.82□□□□□ -0.2
VPS16-208ENST00000487461 GTF2F1P35269 517 aaKnown RBP eCLIP13.82□□□□□ -0.2
VPS16-208ENST00000487461 SARSP49591 514 aaKnown RBP13.82□□□□□ -0.2
VPS16-208ENST00000487461 CRYBB1P53674 252 aaPredicted RBP13.82□□□□□ -0.2
VPS16-208ENST00000487461 DLX2Q07687 328 aaPredicted RBP13.82□□□□□ -0.2
VPS16-208ENST00000487461 TOB2Q14106 344 aaPredicted RBP13.82□□□□□ -0.2
VPS16-208ENST00000487461 KIZQ2M2Z5 673 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 NAALADL2Q58DX5 795 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 TMEM31Q5JXX7 168 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 SMAP1Q8IYB5 467 aaPredicted RBP13.82□□□□□ -0.2
VPS16-208ENST00000487461 METTL13Q8N6R0 699 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 KLHL23Q8NBE8 558 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 BICD2Q8TD16 824 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 P2RX5Q93086 422 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 ADAM2Q99965 735 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 IGFLR1Q9H665 355 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 ZSWIM6Q9HCJ5 1215 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 C11orf16Q9NQ32 467 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 RGS18Q9NS28 235 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 PCDHB7Q9Y5E2 793 aa13.82□□□□□ -0.2
VPS16-208ENST00000487461 RALGAPA2Q2PPJ7 1873 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 C9IYK1 514 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 GPR182O15218 404 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 MSH4O15457 936 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 GPR37L1O60883 481 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 VTNP04004 478 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 SSTR3P32745 418 aaPredicted RBP13.81□□□□□ -0.2
VPS16-208ENST00000487461 USP11P51784 963 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 FAM102BQ5T8I3 360 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 FAM43BQ6ZT52 329 aaPredicted RBP13.81□□□□□ -0.2
VPS16-208ENST00000487461 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 FAM228AQ86W67 206 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 CCDC148Q8NFR7 591 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 GJA10Q969M2 543 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 OSMRQ99650 979 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
VPS16-208ENST00000487461 SH3GLB2Q9NR46 395 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 SAMM50Q9Y512 469 aa13.81□□□□□ -0.2
VPS16-208ENST00000487461 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 EVPLQ92817 2033 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 DENND3A2RUS2 1198 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 FAM86C2PA6NEL3 165 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 WDR64B1ANS9 1081 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 MAGEB2O15479 319 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 LINC01565O15544 149 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 ZNF862O60290 1169 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 IRS1P35568 1242 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 CLCN3P51790 818 aa13.8□□□□□ -0.2
VPS16-208ENST00000487461 NLRP5P59047 1200 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms