RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ECI1P42126 302 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 GFRA1P56159 465 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 SUMO1P63165 101 aaKnown RBP7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 FOXO4P98177 505 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 SCRN1Q12765 414 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 C21orf62-AS1Q17RA5 79 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 ZKSCAN2Q63HK3 967 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 ATF7IPQ6VMQ6 1270 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 TTLL11Q8NHH1 800 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 KCTD13Q8WZ19 329 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 CCDC140Q96MF4 163 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 CRAMP1Q96RY5 1269 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 PLA2G12BQ9BX93 195 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 SEMA6BQ9H3T3 888 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 MKI67P46013 3256 aaKnown RBP7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 CACNA1FO60840 1977 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 UTYO14607 1347 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 CDHR2Q9BYE9 1310 aa7.69□□□□□ -1.18
RTFDC1-209ENST00000487211 KIF13BQ9NQT8 1826 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 CPP00450 1065 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 IFNGR1P15260 489 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 CCT4P50991 539 aaKnown RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 GYS2P54840 703 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 PCBP3P57721 371 aaKnown RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 CBX2Q14781 532 aaPredicted RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 PRSS53Q2L4Q9 553 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 TAF7LQ5H9L4 462 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 PRSS36Q5K4E3 855 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 CREG2Q8IUH2 290 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 TMEM145Q8NBT3 493 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 RPGRQ92834 1020 aaKnown RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 CELF1Q92879 486 aaKnown RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 RBM17Q96I25 401 aaKnown RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 SUCLG2Q96I99 432 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 HRASLS5Q96KN8 279 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 FCRL3Q96P31 734 aaPredicted RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 FOXP3Q9BZS1 431 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 ATP13A1Q9HD20 1204 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 C9orf78Q9NZ63 289 aaPredicted RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 TCFL5Q9UL49 500 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 KIAA1551Q9HCM1 1747 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 ABCC4O15439 1325 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 KIF16BQ96L93 1317 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 N4BP2Q86UW6 1770 aaPredicted RBP7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 ARFGEF2Q9Y6D5 1785 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 ANKRD31Q8N7Z5 1873 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 RIC1Q4ADV7 1423 aa7.68□□□□□ -1.18
RTFDC1-209ENST00000487211 TNRC6CQ9HCJ0 1690 aaKnown RBP7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 AURKAO14965 403 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 FKTNO75072 461 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 BBOX1O75936 387 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 GSTM1P09488 218 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 NCLP19338 710 aaKnown RBP7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 CTSWP56202 376 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 RPS8P62241 208 aaKnown RBP7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 MAP4K2Q12851 820 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 GAB4Q2WGN9 574 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 LMBR1LQ6UX01 489 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 DDX46Q7L014 1031 aaKnown RBP7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 TMEM57Q8N5G2 664 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 SNX27Q96L92 541 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 SLC12A9Q9BXP2 914 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 GREM2Q9H772 168 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 NCOA5Q9HCD5 579 aaKnown RBP7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 BACE2Q9Y5Z0 518 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 CASP8AP2Q9UKL3 1982 aa7.67□□□□□ -1.18
RTFDC1-209ENST00000487211 DNAJC25-GNG10A0A024R161 153 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 BLACEA4D250 179 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 C2orf71A6NGG8 1288 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 ZNF205O95201 554 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 SCG5P05408 212 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 GRIK1P39086 918 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 SOX10P56693 466 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 GRAPQ13588 217 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 AOC3Q16853 763 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 CCDC152Q4G0S7 254 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 RNF187Q5TA31 235 aaPredicted RBP7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 C20orf194Q5TEA3 1177 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 RNF111Q6ZNA4 994 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 TMPRSS7Q7RTY8 843 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 ANKRD44Q8N8A2 993 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 GRAPLQ8TC17 118 aaPredicted RBP7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 PANK1Q8TE04 598 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 ASB11Q8WXH4 323 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 MEIS3Q99687 375 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 MCOLN1Q9GZU1 580 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 BICC1Q9H694 974 aaKnown RBP7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 GPRC5CQ9NQ84 441 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 RNF112Q9ULX5 631 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 PCDHA11Q9Y5I1 949 aa7.66□□□□□ -1.18
RTFDC1-209ENST00000487211 PLD2O14939 933 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 THBDP07204 575 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 SEPHS1P49903 392 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 CNTNAP1P78357 1384 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 PRKCQQ04759 706 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 EGR3Q06889 387 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 CYP4F3Q08477 520 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 PABPC4Q13310 644 aaKnown RBP eCLIP7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 RABL6Q3YEC7 729 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms