RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 RPS8P62241 208 aaKnown RBP8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SNX1Q13596 522 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 CAPN12Q6ZSI9 719 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 CD302Q8IX05 232 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 FAM186BQ8IYM0 893 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 LRRC47Q8N1G4 583 aaKnown RBP8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 STAMBPL1Q96FJ0 436 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SEMA6BQ9H3T3 888 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 A1CFQ9NQ94 594 aaKnown RBP8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 ATXN2Q99700 1313 aaKnown RBP8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 TCRBV5S4A2TA0A5A2 114 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 F8W031 263 aaPredicted RBP8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 IGF2BP3O00425 579 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 FGFR4P22455 802 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 RAD23BP54727 409 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 CYP4A11Q02928 519 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SGO2Q562F6 1265 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 PRR16Q569H4 304 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 KIAA1755Q5JYT7 1200 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 MEI1Q5TIA1 1274 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 CENPPQ6IPU0 288 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 CYP4F22Q6NT55 531 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 KCNV1Q6PIU1 500 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 USP37Q86T82 979 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SCYL3Q8IZE3 742 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 GRK7Q8WTQ7 553 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SYN2Q92777 582 aaPredicted RBP8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 KIFAP3Q92845 792 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 OSBPL1AQ9BXW6 950 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 PACSIN1Q9BY11 444 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 PRDM16Q9HAZ2 1276 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 ARL2BPQ9Y2Y0 163 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 POC1B-GALNT4F8VUJ3 575 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 MAPK13O15264 365 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 CAND2O75155 1236 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 KRT5P13647 590 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SLC8A3P57103 927 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 PTK2Q05397 1052 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 GRM4Q14833 912 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SUSD4Q5VX71 490 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SPATA21Q7Z572 469 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 TMEM47Q9BQJ4 181 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 L3MBTL1Q9Y468 752 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SYNGAP1Q96PV0 1343 aa8.28□□□□□ -1.08
COL6A4P1-202ENST00000487147 SRRM3A6NNA2 597 aaPredicted RBP8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 ERVV-1B6SEH8 477 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 PJA2O43164 708 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 GSTA1P08263 222 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 GHRP10912 638 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 ACTN1P12814 892 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 PSMC2P35998 433 aaKnown RBP8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 DHX34Q14147 1143 aaKnown RBP8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 SLC29A2Q14542 456 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 TMED2Q15363 201 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 GLYCTKQ8IVS8 523 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 SRRM1Q8IYB3 904 aaKnown RBP8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 MREGQ8N565 214 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 TGS1Q96RS0 853 aaKnown RBP8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 FAM129AQ9BZQ8 928 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 KIF9Q9HAQ2 790 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 FGFR1OP2Q9NVK5 253 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 GRIN2DO15399 1336 aa8.27□□□□□ -1.08
COL6A4P1-202ENST00000487147 E9PMD0 336 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 CHRNA3P32297 505 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 SLC30A9Q6PML9 568 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 RHOT2Q8IXI1 618 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 FBXO41Q8TF61 875 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 RFFLQ8WZ73 363 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 PIGBQ92521 554 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 RPGRQ92834 1020 aaKnown RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 ERP44Q9BS26 406 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 EHMT1Q9H9B1 1298 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMEM260Q9NX78 707 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 DBR1Q9UK59 544 aaKnown RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 RASSF10A6NK89 507 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 MIF4GDA9UHW6 222 aaKnown RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 WNT7AO00755 349 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 ATP5HO75947 161 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 ABCB11O95342 1321 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TDP2O95551 362 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 UCHL3P15374 230 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 NQO1P15559 274 aaKnown RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 GSCP56915 257 aaPredicted RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 ITIH4Q14624 930 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TRIP13Q15645 432 aaPredicted RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 RCSD1Q6JBY9 416 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TPTE2Q6XPS3 522 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 SLFN12Q8IYM2 578 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 LRRC37BQ96QE4 947 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 PEAK1Q9H792 1746 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 MCM8Q9UJA3 840 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 ANAPC4Q9UJX5 808 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TRPC6Q9Y210 931 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 STXBP3O00186 592 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 MEIS1O00470 390 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 PRDX5P30044 214 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 GALCP54803 685 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 UBE2SQ16763 222 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms