RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 ERVK-21P61565 698 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 OGFOD2Q6N063 350 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 ATG14Q6ZNE5 492 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 ESPNLQ6ZVH7 1005 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 CXXC5Q7LFL8 322 aaKnown RBP6.67□□□□□ -1.34
LMBR1-218ENST00000486837 ZBTB8AQ96BR9 441 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 ACAP3Q96P50 834 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 NOX5Q96PH1 765 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 TUBGCP5Q96RT8 1024 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 CEP89Q96ST8 783 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 SYT3Q9BQG1 590 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 VTA1Q9NP79 307 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 MSRAQ9UJ68 235 aa6.67□□□□□ -1.34
LMBR1-218ENST00000486837 RFXAPO00287 272 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 MAFO75444 373 aaPredicted RBP6.66□□□□□ -1.34
LMBR1-218ENST00000486837 PRPF6O94906 941 aaKnown RBP6.66□□□□□ -1.34
LMBR1-218ENST00000486837 PLA2G1BP04054 148 aaKnown RBP6.66□□□□□ -1.34
LMBR1-218ENST00000486837 SLC6A3Q01959 620 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 ITKQ08881 620 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 STILQ15468 1287 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 SYDE2Q5VT97 1194 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 CNKSR3Q6P9H4 555 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 FNIP1Q8TF40 1166 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 ZNF496Q96IT1 587 aaPredicted RBP6.66□□□□□ -1.34
LMBR1-218ENST00000486837 ASPSCR1Q9BZE9 553 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 TRIM8Q9BZR9 551 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 WNT8AQ9H1J5 351 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 CD320Q9NPF0 282 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 TOPORSQ9NS56 1045 aaPredicted RBP6.66□□□□□ -1.34
LMBR1-218ENST00000486837 KCND1Q9NSA2 647 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 KCNG1Q9UIX4 513 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 ZFP69BQ9UJL9 534 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 CNOT6Q9ULM6 557 aaKnown RBP6.66□□□□□ -1.34
LMBR1-218ENST00000486837 SMG5Q9UPR3 1016 aaKnown RBP6.66□□□□□ -1.34
LMBR1-218ENST00000486837 WASHC2AQ641Q2 1341 aa6.66□□□□□ -1.34
LMBR1-218ENST00000486837 FBXO21O94952 628 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 IL18BPO95998 194 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 C1QTNF9P0C862 333 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 APEX1P27695 318 aaKnown RBP6.65□□□□□ -1.34
LMBR1-218ENST00000486837 SSPNQ14714 243 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 ZNF385BQ569K4 471 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 PRAMEF9Q5VWM5 478 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 SLFN12LQ6IEE8 588 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 KANSL1Q7Z3B3 1105 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 STK32CQ86UX6 486 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 CXorf67Q86X51 503 aaPredicted RBP6.65□□□□□ -1.34
LMBR1-218ENST00000486837 WDR48Q8TAF3 677 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 MTMR8Q96EF0 704 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 ZSWIM3Q96MP5 696 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 OR10A5Q9H207 317 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 MS4A5Q9H3V2 200 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 EPB41L4AQ9HCS5 686 aaPredicted RBP6.65□□□□□ -1.34
LMBR1-218ENST00000486837 TRHDEQ9UKU6 1024 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 SPEF1Q9Y4P9 236 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 KCTD3Q9Y597 815 aa6.65□□□□□ -1.34
LMBR1-218ENST00000486837 MAFGO15525 162 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 PI3P19957 117 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 GLRBP48167 497 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 BCAR1P56945 870 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 IL13RA1P78552 427 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 ADCY2Q08462 1091 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 KLF1Q13351 362 aaPredicted RBP6.64□□□□□ -1.35
LMBR1-218ENST00000486837 SMAD4Q13485 552 aaKnown RBP6.64□□□□□ -1.35
LMBR1-218ENST00000486837 MOGSQ13724 837 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 MYBPC3Q14896 1274 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 PLEKHG6Q3KR16 790 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 PRR31Q5SQ13 230 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 KIAA1841Q6NSI8 718 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 LRSAM1Q6UWE0 723 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 SAPCD2Q86UD0 394 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 LMBR1Q8WVP7 490 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 RPGRQ92834 1020 aaKnown RBP6.64□□□□□ -1.35
LMBR1-218ENST00000486837 PWWP2AQ96N64 755 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 TACO1Q9BSH4 297 aaKnown RBP6.64□□□□□ -1.35
LMBR1-218ENST00000486837 MYL10Q9BUA6 226 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 IRF2BPLQ9H1B7 796 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 POFUT1Q9H488 388 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 C14orf119Q9NWQ9 140 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 CROTQ9UKG9 612 aa6.64□□□□□ -1.35
LMBR1-218ENST00000486837 LCHNA4D1U4 455 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 GOLGA8AA7E2F4 631 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 GOLGA8BA8MQT2 603 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 ELL2O00472 640 aaPredicted RBP6.63□□□□□ -1.35
LMBR1-218ENST00000486837 RPL13P26373 211 aaKnown RBP6.63□□□□□ -1.35
LMBR1-218ENST00000486837 RGS3P49796 1198 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 MANFP55145 182 aaKnown RBP6.63□□□□□ -1.35
LMBR1-218ENST00000486837 NFATC3Q12968 1075 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 RTP5Q14D33 572 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 PDCD1Q15116 288 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 INAVAQ3KP66 663 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 ZNF648Q5T619 568 aaPredicted RBP6.63□□□□□ -1.35
LMBR1-218ENST00000486837 KANK2Q63ZY3 851 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 TTLL7Q6ZT98 887 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 STPG3Q8N7X2 389 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 FERMT2Q96AC1 680 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 SEMA4AQ9H3S1 761 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 METTL14Q9HCE5 456 aaKnown RBP6.63□□□□□ -1.35
LMBR1-218ENST00000486837 FBXO10Q9UK96 956 aa6.63□□□□□ -1.35
LMBR1-218ENST00000486837 ST20-MTHFSA0A0A6YYL1 179 aa6.62□□□□□ -1.35
LMBR1-218ENST00000486837 SH3D21A4FU49 640 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms