RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 IGSF9BQ9UPX0 1349 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 CHMP2AO43633 222 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 LARGE1O95461 756 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 C22orf31O95567 290 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 RDM1Q8NG50 284 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 ETNPPLQ8TBG4 499 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 FTHL17Q9BXU8 183 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 LMCD1Q9NZU5 365 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 DDX25Q9UHL0 483 aaKnown RBP20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 PADI3Q9ULW8 664 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 PTPRSQ13332 1948 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 PRUNE2Q8WUY3 3088 aa20.78■□□□□ 0.92
PRPF40A-209ENST00000486100 MAGEB2O15479 319 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 ZNF862O60290 1169 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 LETM2Q2VYF4 491 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 KRT40Q6A162 431 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 B3GNT9Q6UX72 402 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 FAM43BQ6ZT52 329 aaPredicted RBP20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 MIER3Q7Z3K6 550 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 NEK8Q86SG6 692 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 RTN4RL1Q86UN2 441 aaPredicted RBP20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 OXER1Q8TDS5 423 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 ATXN2LQ8WWM7 1075 aaKnown RBP20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 C17orf80Q9BSJ5 609 aa20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 TSPYL2Q9H2G4 693 aaPredicted RBP20.77■□□□□ 0.92
PRPF40A-209ENST00000486100 OATP04181 439 aa20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 PAK2Q13177 524 aa20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 PPP4R3AQ6IN85 833 aa20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 METTL13Q8N6R0 699 aa20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 NSUN7Q8NE18 718 aaKnown RBP20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 GDPD5Q8WTR4 605 aa20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 SAMD11Q96NU1 681 aa20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 CDHR5Q9HBB8 845 aa20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 THEGQ9P2T0 379 aa20.76■□□□□ 0.91
PRPF40A-209ENST00000486100 SLC37A4O43826 429 aa20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 GCFC2P16383 781 aaKnown RBP20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 PRKCEQ02156 737 aa20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 UGCGQ16739 394 aa20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 PIK3AP1Q6ZUJ8 805 aa20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 FBXO22Q8NEZ5 403 aa20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 LINC01599Q8WXQ3 324 aa20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 FAM20AQ96MK3 541 aa20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 NAP1L4Q99733 375 aaKnown RBP20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 GINS2Q9Y248 185 aa20.75■□□□□ 0.91
PRPF40A-209ENST00000486100 TMOD1P28289 359 aa20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 CRYBB1P53674 252 aaPredicted RBP20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 NFX1Q12986 1120 aaKnown RBP20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 EPC2Q52LR7 807 aa20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 TJAP1Q5JTD0 557 aa20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 ODR4Q5SWX8 454 aa20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 EFCAB12Q6NXP0 572 aa20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 MICAL3Q7RTP6 2002 aa20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 SYMPKQ92797 1274 aaKnown RBP20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 BRMS1Q9HCU9 246 aa20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 NOC2LQ9Y3T9 749 aaKnown RBP20.74■□□□□ 0.91
PRPF40A-209ENST00000486100 CCNT1O60563 726 aaKnown RBP20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 GPR32O75388 356 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 RPS6KA5O75582 802 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 KRT2P35908 639 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 SKIV2LQ15477 1246 aaKnown RBP20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 TMEM266Q2M3C6 531 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 EARS2Q5JPH6 523 aaKnown RBP20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 TMEM192Q8IY95 271 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 CRIPAKQ8N1N5 446 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 ZNF710Q8N1W2 664 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 FIBCD1Q8N539 461 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 LINC01465Q8N7H1 131 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 ZNF689Q96CS4 500 aaPredicted RBP20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 ASB2Q96Q27 587 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 NIFKQ9BYG3 293 aaKnown RBP20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 TMX1Q9H3N1 280 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 ERVK-5Q9HDB9 667 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 KCNMB3Q9NPA1 279 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 LIMCH1Q9UPQ0 1083 aa20.73■□□□□ 0.91
PRPF40A-209ENST00000486100 TBX3O15119 743 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 GPR182O15218 404 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 JAK2O60674 1132 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 DGKIO75912 1065 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 VTNP04004 478 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 CLCN3P51790 818 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 MRPS5P82675 430 aaKnown RBP20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 NR5A1Q13285 461 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 TARBP2Q15633 366 aaKnown RBP20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 KIZQ2M2Z5 673 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 C8orf34Q49A92 452 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 XKR3Q5GH77 459 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 TMEM40Q8WWA1 233 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 TNFRSF25Q93038 417 aa20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 RC3H2Q9HBD1 1191 aaKnown RBP20.72■□□□□ 0.91
PRPF40A-209ENST00000486100 STBD1O95210 358 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 STAG3L1P0CL83 205 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 PPP2R5CQ13362 524 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 NPAS4Q8IUM7 802 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 LRRC71Q8N4P6 559 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 MAP7D2Q96T17 732 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 PPP1R16BQ96T49 567 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 OSMRQ99650 979 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 ST3GAL5Q9UNP4 418 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 AKT3Q9Y243 479 aa20.71■□□□□ 0.91
PRPF40A-209ENST00000486100 TRANK1O15050 2925 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms