RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 COL1A2P08123 1366 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 LOXHD1Q8IVV2 1947 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 CUL9Q8IWT3 2517 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 MSH4O15457 936 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 PSMD10O75832 226 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 GJB5O95377 273 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 CHRNA1P02708 482 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 PSAPP07602 524 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 FDPSP14324 419 aaKnown RBP7.93□□□□□ -1.14
VPS50-218ENST00000485994 ATP4AP20648 1035 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 SFNP31947 248 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 NEK4P51957 841 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 HTRA4P83105 476 aaPredicted RBP7.93□□□□□ -1.14
VPS50-218ENST00000485994 SP4Q02446 784 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 STK3Q13188 491 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 NONOQ15233 471 aaKnown RBP eCLIP7.93□□□□□ -1.14
VPS50-218ENST00000485994 ME3Q16798 604 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 TCTN1Q2MV58 587 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 PRR16Q569H4 304 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 SWSAP1Q6NVH7 229 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 KRT25Q7Z3Z0 450 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 SLC17A8Q8NDX2 589 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 ATP8B4Q8TF62 1192 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 BBXQ8WY36 941 aaPredicted RBP7.93□□□□□ -1.14
VPS50-218ENST00000485994 MYLIPQ8WY64 445 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 SEPT8Q92599 483 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 SLC5A5Q92911 643 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 TOP1MTQ969P6 601 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 FAM161BQ96MY7 647 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 GAS2L1Q99501 681 aaPredicted RBP7.93□□□□□ -1.14
VPS50-218ENST00000485994 NAP1L4Q99733 375 aaKnown RBP7.93□□□□□ -1.14
VPS50-218ENST00000485994 LARP6Q9BRS8 491 aaKnown RBP7.93□□□□□ -1.14
VPS50-218ENST00000485994 SLC4A5Q9BY07 1137 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 ADAM33Q9BZ11 813 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 NKX2-4Q9H2Z4 354 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 ZNF302Q9NR11 478 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 LMCD1Q9NZU5 365 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 TUBE1Q9UJT0 475 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 INSL6Q9Y581 213 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 PTPRSQ13332 1948 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 PRUNE2Q8WUY3 3088 aa7.93□□□□□ -1.14
VPS50-218ENST00000485994 WDR64B1ANS9 1081 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 ZBTB42B2RXF5 422 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 TBX3O15119 743 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 MAGEB2O15479 319 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 TLL1O43897 1013 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 AMHP03971 560 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 GCFC2P16383 781 aaKnown RBP7.92□□□□□ -1.14
VPS50-218ENST00000485994 KLRC1P26715 233 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 RBM25P49756 843 aaKnown RBP7.92□□□□□ -1.14
VPS50-218ENST00000485994 JAK3P52333 1124 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 RABGGTBP53611 331 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 C8orf34Q49A92 452 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 FBXO47Q5MNV8 452 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 PDXDC2PQ6P474 469 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 MTHFD1LQ6UB35 978 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 RUFY4Q6ZNE9 571 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 CCDC60Q8IWA6 550 aaPredicted RBP7.92□□□□□ -1.14
VPS50-218ENST00000485994 RASGRP4Q8TDF6 673 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 GTF3C6Q969F1 213 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 FAM167AQ96KS9 214 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 ZSCAN31Q96LW9 406 aaPredicted RBP7.92□□□□□ -1.14
VPS50-218ENST00000485994 FAM20AQ96MK3 541 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 LLPHQ9BRT6 129 aaKnown RBP7.92□□□□□ -1.14
VPS50-218ENST00000485994 TEKT3Q9BXF9 490 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 DISC1Q9NRI5 854 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 NRBP2Q9NSY0 501 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 PKD2L1Q9P0L9 805 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 ORC3Q9UBD5 711 aaPredicted RBP7.92□□□□□ -1.14
VPS50-218ENST00000485994 TCEAL9Q9UHQ7 104 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 CEP131Q9UPN4 1083 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 BRWD1Q9NSI6 2320 aa7.92□□□□□ -1.14
VPS50-218ENST00000485994 MYO7AQ13402 2215 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.91□□□□□ -1.14
VPS50-218ENST00000485994 ENPP3O14638 875 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 BACH1O14867 736 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 PPFIA3O75145 1194 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 CA3P07451 260 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 MYOGP15173 224 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 FOSL2P15408 326 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 MARK3P27448 753 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 ERVK-21P61565 698 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 DEFB103AP81534 67 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
VPS50-218ENST00000485994 CDC42EP1Q00587 391 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 TAP1Q03518 808 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 ODR4Q5SWX8 454 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 PPP2R2DQ66LE6 453 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 TSHZ1Q6ZSZ6 1077 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 NEK8Q86SG6 692 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 KIAA0319LQ8IZA0 1049 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 CRIPAKQ8N1N5 446 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 LINC01465Q8N7H1 131 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 NSUN7Q8NE18 718 aaKnown RBP7.91□□□□□ -1.14
VPS50-218ENST00000485994 MAFAQ8NHW3 353 aaPredicted RBP7.91□□□□□ -1.14
VPS50-218ENST00000485994 ETNPPLQ8TBG4 499 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 DNAJB3Q8WWF6 145 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 AIFM3Q96NN9 605 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 SAMD11Q96NU1 681 aa7.91□□□□□ -1.14
VPS50-218ENST00000485994 KIF2CQ99661 725 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms