RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 IGKV6-21A0A0C4DH24 114 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 TMEM150BA6NC51 233 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 MBD3O95983 291 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 MYL3P08590 195 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 PLA2G4BP0C869 781 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 STAT6P42226 847 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 PSEN2P49810 448 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 NPEPPSP55786 919 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 MCM6Q14566 821 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 MFSD10Q14728 455 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 MARCH8Q5T0T0 291 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 OTUD6AQ7L8S5 288 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 KATNAL1Q9BW62 490 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 BHMT2Q9H2M3 363 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 DHX33Q9H6R0 707 aaKnown RBP17.67■□□□□ 0.42
APOE-205ENST00000485628 CYP26B1Q9NR63 512 aa17.67■□□□□ 0.42
APOE-205ENST00000485628 ZNF215Q9UL58 517 aaPredicted RBP17.67■□□□□ 0.42
APOE-205ENST00000485628 COL1A2P08123 1366 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 KAT6AQ92794 2004 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 MBLAC1A4D2B0 266 aaPredicted RBP17.66■□□□□ 0.42
APOE-205ENST00000485628 COL6A1P12109 1028 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 HIC1Q14526 733 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 KIAA0753Q2KHM9 967 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 KLHL40Q2TBA0 621 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 RINT1Q6NUQ1 792 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 LINC01465Q8N7H1 131 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 ANKLE1Q8NAG6 615 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 SPATA20Q8TB22 786 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 PAGE5Q96GU1 130 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 CDK5RAP3Q96JB5 506 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 TNMDQ9H2S6 317 aa17.66■□□□□ 0.42
APOE-205ENST00000485628 TRIP12Q14669 1992 aaPredicted RBP17.66■□□□□ 0.42
APOE-205ENST00000485628 INSRRP14616 1297 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 CYP11B2P19099 503 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 MARK3P27448 753 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 ZRSR1Q15695 479 aaKnown RBP17.65■□□□□ 0.42
APOE-205ENST00000485628 ZNF484Q5JVG2 852 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 PLA2G4FQ68DD2 849 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 UBE2Q1Q7Z7E8 422 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 DNAJC19Q96DA6 116 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 CTAGE1Q96RT6 745 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 C7orf25Q9BPX7 421 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 KCND2Q9NZV8 630 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 DNAH12Q6ZR08 3092 aa17.65■□□□□ 0.42
APOE-205ENST00000485628 A0A1W2PQ45 241 aaPredicted RBP17.64■□□□□ 0.41
APOE-205ENST00000485628 A0A1W2PQY0 241 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 MYMKA6NI61 221 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 MAFO75444 373 aaPredicted RBP17.64■□□□□ 0.41
APOE-205ENST00000485628 MYCP01106 439 aaPredicted RBP17.64■□□□□ 0.41
APOE-205ENST00000485628 MYL1P05976 194 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 SMIM10L2AP0DMW4 78 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 SMIM10L2BP0DMW5 78 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 GUCY2CP25092 1073 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 CDK7P50613 346 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 KANK3Q6NY19 840 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 RBM43Q6ZSC3 357 aaKnown RBP17.64■□□□□ 0.41
APOE-205ENST00000485628 SV2BQ7L1I2 683 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 RUSC1Q9BVN2 902 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 XPNPEP1Q9NQW7 623 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 NRCAMQ92823 1304 aa17.64■□□□□ 0.41
APOE-205ENST00000485628 FRMD3A2A2Y4 597 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 RRN3P2A6NIE6 340 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 C22orf31O95567 290 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 PTPN11Q06124 597 aaPredicted RBP17.63■□□□□ 0.41
APOE-205ENST00000485628 MAPK7Q13164 816 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
APOE-205ENST00000485628 TPRNQ4KMQ1 711 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 XKR9Q5GH70 373 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 PADI6Q6TGC4 694 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 DAW1Q8N136 415 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 CNNM3Q8NE01 707 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 CEP170P1Q96L14 293 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 SH2D3AQ9BRG2 576 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 SEZ6LQ9BYH1 1024 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 TRIM9Q9C026 710 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 CLSTN2Q9H4D0 955 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 HDAC6Q9UBN7 1215 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 SEPT9Q9UHD8 586 aaPredicted RBP17.63■□□□□ 0.41
APOE-205ENST00000485628 EVPLQ92817 2033 aa17.63■□□□□ 0.41
APOE-205ENST00000485628 DGAT1O75907 488 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 RFC5P40937 340 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 SARSP49591 514 aaKnown RBP17.62■□□□□ 0.41
APOE-205ENST00000485628 EHHADHQ08426 723 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 DPYDQ12882 1025 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 ITGA7Q13683 1181 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 GIT2Q14161 759 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 GRIK4Q16099 956 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 SKOR2Q2VWA4 1001 aaPredicted RBP17.62■□□□□ 0.41
APOE-205ENST00000485628 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
APOE-205ENST00000485628 NT5DC1Q5TFE4 455 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 C1orf53Q5VUE5 145 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 CKAP2LQ8IYA6 745 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 GRAMD1CQ8IYS0 662 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 CEP57L1Q8IYX8 460 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 RASSF8Q8NHQ8 419 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 LMBR1Q8WVP7 490 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 DDX12PQ92771 950 aa17.62■□□□□ 0.41
APOE-205ENST00000485628 GTF2IRD1Q9UHL9 959 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms