RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 USP30Q70CQ3 517 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 ADGRE4PQ86SQ3 457 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 C2orf69Q8N8R5 385 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 HIPK4Q8NE63 616 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 GFM2Q969S9 779 aaKnown RBP5.25□□□□□ -1.57
VPS50-217ENST00000485140 LRRC37BQ96QE4 947 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 FOXB1Q99853 325 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 SLC52A2Q9HAB3 445 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 ACSS2Q9NR19 701 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 BTBD7Q9P203 1132 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 B3GALT1Q9Y5Z6 326 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 CYP17A1P05093 508 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 C6P13671 934 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 IL13RA1P78552 427 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 AGBL4Q5VU57 503 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 TRIM68Q6AZZ1 485 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 CRIP3Q6Q6R5 217 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 TAX1BP1Q86VP1 789 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 NOSTRINQ8IVI9 506 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 SREK1Q8WXA9 508 aaKnown RBP5.24□□□□□ -1.57
VPS50-217ENST00000485140 DLG3Q92796 817 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 GBP4Q96PP9 640 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 MPHOSPH9Q99550 1183 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 DNAJC7Q99615 494 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 OSBPL2Q9H1P3 480 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 VPS11Q9H270 941 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 CABP5Q9NP86 173 aa5.24□□□□□ -1.57
VPS50-217ENST00000485140 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.23□□□□□ -1.57
VPS50-217ENST00000485140 CDC14BO60729 498 aa5.23□□□□□ -1.57
VPS50-217ENST00000485140 H2AFYO75367 372 aaKnown RBP5.23□□□□□ -1.57
VPS50-217ENST00000485140 RANGAP1P46060 587 aaPredicted RBP5.23□□□□□ -1.57
VPS50-217ENST00000485140 IRF9Q00978 393 aa5.23□□□□□ -1.57
VPS50-217ENST00000485140 R3HDM1Q15032 1099 aaKnown RBP5.23□□□□□ -1.57
VPS50-217ENST00000485140 TMEM177Q53S58 311 aa5.23□□□□□ -1.57
VPS50-217ENST00000485140 KANK2Q63ZY3 851 aa5.23□□□□□ -1.57
VPS50-217ENST00000485140 ZNF585AQ6P3V2 769 aa5.23□□□□□ -1.57
VPS50-217ENST00000485140 OTOP1Q7RTM1 612 aa5.23□□□□□ -1.57
VPS50-217ENST00000485140 GPR155Q7Z3F1 870 aa5.23□□□□□ -1.57
VPS50-217ENST00000485140 MRFAP1L1Q96HT8 127 aa5.23□□□□□ -1.57
VPS50-217ENST00000485140 C12orf65Q9H3J6 166 aaKnown RBP5.23□□□□□ -1.57
VPS50-217ENST00000485140 NCOA5Q9HCD5 579 aaKnown RBP5.23□□□□□ -1.57
VPS50-217ENST00000485140 TCRBV16S1A1N1A0A5B0 115 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 SCDO00767 359 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 ASLP04424 464 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 ZNF888P0CJ79 500 aaPredicted RBP5.22□□□□□ -1.57
VPS50-217ENST00000485140 IGFALSP35858 605 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 KCNQ1P51787 676 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 ROM1Q03395 351 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 ADCY1Q08828 1119 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 CDSNQ15517 529 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 ZNF174Q15697 407 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 PHF19Q5T6S3 580 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 KLHDC10Q6PID8 442 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 UBE2R2Q712K3 238 aaPredicted RBP5.22□□□□□ -1.57
VPS50-217ENST00000485140 OVCH1Q7RTY7 1134 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 BRAPQ7Z569 592 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 CISD2Q8N5K1 135 aaKnown RBP5.22□□□□□ -1.57
VPS50-217ENST00000485140 ASB15Q8WXK1 588 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 ADOQ96SZ5 270 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 SYNPO2Q9UMS6 1093 aa5.22□□□□□ -1.57
VPS50-217ENST00000485140 FAM221BA6H8Z2 402 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 GOLGA6L22H0YM25 854 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 MMEP08473 750 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 MOGSQ13724 837 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 ZZZ3Q8IYH5 903 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 CHST14Q8NCH0 376 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 RPGRQ92834 1020 aaKnown RBP5.21□□□□□ -1.58
VPS50-217ENST00000485140 SORCS2Q96PQ0 1159 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 PCIF1Q9H4Z3 704 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 PTCH2Q9Y6C5 1203 aa5.21□□□□□ -1.58
VPS50-217ENST00000485140 H7C1D1 291 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 SLC26A4O43511 780 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 FOXS1O43638 330 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 MPIG6BO95866 241 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 MRE11P49959 708 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 BCAR1P56945 870 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 ALDH6A1Q02252 535 aaKnown RBP5.2□□□□□ -1.58
VPS50-217ENST00000485140 PCOLCEQ15113 449 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 RNF151Q2KHN1 245 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 ZCCHC8Q6NZY4 707 aaKnown RBP5.2□□□□□ -1.58
VPS50-217ENST00000485140 RNF207Q6ZRF8 634 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 ZNF662Q6ZS27 426 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 SPRED1Q7Z699 444 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 ANKRD35Q8N283 1001 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 SLC7A14Q8TBB6 771 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 ZNF747Q9BV97 191 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 INTS7Q9NVH2 962 aaKnown RBP5.2□□□□□ -1.58
VPS50-217ENST00000485140 UCKL1Q9NWZ5 548 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 SAE1Q9UBE0 346 aaPredicted RBP5.2□□□□□ -1.58
VPS50-217ENST00000485140 COQ6Q9Y2Z9 468 aa5.2□□□□□ -1.58
VPS50-217ENST00000485140 AKAP8O43823 692 aaKnown RBP5.19□□□□□ -1.58
VPS50-217ENST00000485140 RFPL3O75679 317 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 RASGRP1O95267 797 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 PEX11BO96011 259 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 ACRV1P26436 265 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 ACVRL1P37023 503 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 RRADP55042 308 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 CD83Q01151 205 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 ABHD18Q0P651 414 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 TMEM132BQ14DG7 1078 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms