RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 FAM189BP81408 668 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 TMEM62Q0P6H9 643 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 APOA5Q6Q788 366 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 SYNE3Q6ZMZ3 975 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 SLC24A5Q71RS6 500 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 KIAA0319LQ8IZA0 1049 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 ATP8B4Q8TF62 1192 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 CDCA3Q99618 268 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-227ENST00000485102 AAASQ9NRG9 546 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 LRFN2Q9ULH4 789 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 PCDHB12Q9Y5F1 795 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 CNTNAP5Q8WYK1 1306 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 GPR182O15218 404 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 DHX15O43143 795 aaKnown RBP14.83□□□□□ -0.04
HDAC6-227ENST00000485102 RPS6KA5O75582 802 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 CCNE2O96020 404 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 ATF7P17544 494 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-227ENST00000485102 NRIP1P48552 1158 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 NFX1Q12986 1120 aaKnown RBP14.83□□□□□ -0.04
HDAC6-227ENST00000485102 PAN2Q504Q3 1202 aaKnown RBP14.83□□□□□ -0.04
HDAC6-227ENST00000485102 ZNF484Q5JVG2 852 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 FAM160B1Q5W0V3 765 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 TMEM184AQ6ZMB5 413 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 TRIM67Q6ZTA4 783 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 MICU3Q86XE3 530 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 CRYGNQ8WXF5 182 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 SUSD6Q92537 303 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 PRRX2Q99811 253 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 ESYT1Q9BSJ8 1104 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 PHF7Q9BWX1 381 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-227ENST00000485102 ANO3Q9BYT9 981 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 ELAC1Q9H777 363 aaKnown RBP14.83□□□□□ -0.04
HDAC6-227ENST00000485102 BARHL2Q9NY43 387 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 LZTS1Q9Y250 596 aa14.83□□□□□ -0.04
HDAC6-227ENST00000485102 NOC2LQ9Y3T9 749 aaKnown RBP14.83□□□□□ -0.04
HDAC6-227ENST00000485102 PLXNA4Q9HCM2 1894 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 MYH9P35579 1960 aaKnown RBP14.82□□□□□ -0.04
HDAC6-227ENST00000485102 ZBTB42B2RXF5 422 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 MGEA5O60502 916 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 CYP3A4P08684 503 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 ADCY7P51828 1080 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 CRYBB1P53674 252 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-227ENST00000485102 RCAN1P53805 252 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 NAPAP54920 295 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 EXOSC10Q01780 885 aaKnown RBP14.82□□□□□ -0.04
HDAC6-227ENST00000485102 KCNC3Q14003 757 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 TMEM266Q2M3C6 531 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 TSGA10IPQ3SY00 556 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 ZNF710Q8N1W2 664 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 RASGRP4Q8TDF6 673 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 TMEM40Q8WWA1 233 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 ADAM2Q99965 735 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 TLE6Q9H808 572 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 CDHR5Q9HBB8 845 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 TLR9Q9NR96 1032 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 TMEM161AQ9NX61 479 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 ST3GAL5Q9UNP4 418 aa14.82□□□□□ -0.04
HDAC6-227ENST00000485102 USP15Q9Y4E8 981 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-227ENST00000485102 IGLV3-22A0A075B6J6 115 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 SMCO2A6NFE2 343 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 FSCN2O14926 492 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 ATP4AP20648 1035 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 GATMP50440 423 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 ZXDAP98168 799 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 PLCB3Q01970 1234 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 DUSP6Q16828 381 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 MCTP2Q6DN12 878 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 RAB11FIP4Q86YS3 637 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 CCDC60Q8IWA6 550 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-227ENST00000485102 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 ZNF302Q9NR11 478 aa14.81□□□□□ -0.04
HDAC6-227ENST00000485102 MAFBQ9Y5Q3 323 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-227ENST00000485102 V9GY48 417 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-227ENST00000485102 DENND3A2RUS2 1198 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 TMEM221A6NGB7 291 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 FAM86B1E9PN63 330 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 M0R296 226 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 FGF18O76093 207 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 FAM86B2P0C5J1 330 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 DSC3Q14574 896 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 RTN1Q16799 776 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 FAM102BQ5T8I3 360 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 RNF20Q5VTR2 975 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 ZNF746Q6NUN9 644 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-227ENST00000485102 MIS18BP1Q6P0N0 1132 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 PDXDC2PQ6P474 469 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 DHX32Q7L7V1 743 aaKnown RBP14.8□□□□□ -0.04
HDAC6-227ENST00000485102 RBM23Q86U06 439 aaKnown RBP14.8□□□□□ -0.04
HDAC6-227ENST00000485102 BBXQ8WY36 941 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-227ENST00000485102 NEK1Q96PY6 1258 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 CWH43Q9H720 699 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 FAM217BQ9NTX9 383 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-227ENST00000485102 TBC1D22BQ9NU19 505 aa14.8□□□□□ -0.04
HDAC6-227ENST00000485102 TYW1Q9NV66 732 aaKnown RBP14.8□□□□□ -0.04
HDAC6-227ENST00000485102 BARX2Q9UMQ3 279 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-227ENST00000485102 ESYT2A0FGR8 921 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 TBKBP1A7MCY6 615 aa14.79□□□□□ -0.04
HDAC6-227ENST00000485102 IPO5O00410 1097 aaKnown RBP14.79□□□□□ -0.04
HDAC6-227ENST00000485102 BACH1O14867 736 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms