RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 PALM2Q8IXS6 379 aa4.94□□□□□ -1.62
VPS50-216ENST00000484954 DNERQ8NFT8 737 aa4.94□□□□□ -1.62
VPS50-216ENST00000484954 KCNH7Q9NS40 1196 aa4.94□□□□□ -1.62
VPS50-216ENST00000484954 CDC42EP3Q9UKI2 254 aa4.94□□□□□ -1.62
VPS50-216ENST00000484954 SLC4A7Q9Y6M7 1214 aa4.94□□□□□ -1.62
VPS50-216ENST00000484954 SLC12A8A0AV02 714 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 PRAMEF22A3QJZ6 481 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 M0R2C6 588 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 DVL2O14641 736 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 KRT37O76014 449 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 CD83Q01151 205 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 TMEM132BQ14DG7 1078 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 STILQ15468 1287 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 SURF1Q15526 300 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 NFE2L2Q16236 605 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 TBR1Q16650 682 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 RNF151Q2KHN1 245 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 KANK2Q63ZY3 851 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 SLFN13Q68D06 897 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 CIR1Q86X95 450 aaPredicted RBP4.93□□□□□ -1.62
VPS50-216ENST00000484954 REXO1L1PQ8IX06 675 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 MRFAP1L1Q96HT8 127 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 WNK4Q96J92 1243 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 GBP4Q96PP9 640 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 LRRC37BQ96QE4 947 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 KIAA1683Q9H0B3 1180 aa4.93□□□□□ -1.62
VPS50-216ENST00000484954 TNPO3Q9Y5L0 923 aaKnown RBP4.93□□□□□ -1.62
VPS50-216ENST00000484954 FOXP2O15409 715 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 ECE1P42892 770 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 KCNQ1P51787 676 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 IRF9Q00978 393 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 USP10Q14694 798 aaKnown RBP4.92□□□□□ -1.62
VPS50-216ENST00000484954 C21orf62-AS1Q17RA5 79 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 ZCCHC8Q6NZY4 707 aaKnown RBP4.92□□□□□ -1.62
VPS50-216ENST00000484954 OTOP1Q7RTM1 612 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 C2orf69Q8N8R5 385 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 ERCC4Q92889 916 aaPredicted RBP4.92□□□□□ -1.62
VPS50-216ENST00000484954 DRC1Q96MC2 740 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 CARD11Q9BXL7 1154 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 ZDHHC5Q9C0B5 715 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 SAMD15Q9P1V8 674 aa4.92□□□□□ -1.62
VPS50-216ENST00000484954 PATE3B3GLJ2 98 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 MATN2O00339 956 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 TRAF5O00463 557 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 FOXS1O43638 330 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 ASMTLO95671 621 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 ETV4P43268 484 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 FNDC3BQ53EP0 1204 aaKnown RBP4.91□□□□□ -1.62
VPS50-216ENST00000484954 TCTN3Q6NUS6 607 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 ZNF585AQ6P3V2 769 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 DPP8Q6V1X1 898 aaPredicted RBP4.91□□□□□ -1.62
VPS50-216ENST00000484954 RTN4RL1Q86UN2 441 aaPredicted RBP4.91□□□□□ -1.62
VPS50-216ENST00000484954 HIPK4Q8NE63 616 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 UBXN4Q92575 508 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 FOXRED1Q96CU9 486 aaPredicted RBP4.91□□□□□ -1.62
VPS50-216ENST00000484954 NEIL1Q96FI4 390 aaPredicted RBP4.91□□□□□ -1.62
VPS50-216ENST00000484954 RNPC3Q96LT9 517 aaKnown RBP4.91□□□□□ -1.62
VPS50-216ENST00000484954 LMF1Q96S06 567 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 BTBD2Q9BX70 525 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 KLC2Q9H0B6 622 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 OR10A5Q9H207 317 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 TMEM260Q9NX78 707 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 C11orf21Q9P2W6 132 aa4.91□□□□□ -1.62
VPS50-216ENST00000484954 GOLGA6L22H0YM25 854 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 OPA1O60313 960 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 CUTAO60888 179 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 SDHAP31040 664 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 IGFALSP35858 605 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 CHST14Q8NCH0 376 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 Q8TCH9 128 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 DPYSL5Q9BPU6 564 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 BOCQ9BWV1 1114 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 SEC61A2Q9H9S3 476 aa4.9□□□□□ -1.63
VPS50-216ENST00000484954 FAM83GA6ND36 823 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 ZNF623O75123 536 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 HIP1RO75146 1068 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 NPTXRO95502 500 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 HMGCRP04035 888 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 STAT5BP51692 787 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 PABPC4Q13310 644 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS50-216ENST00000484954 MOGSQ13724 837 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 R3HDM1Q15032 1099 aaKnown RBP4.89□□□□□ -1.63
VPS50-216ENST00000484954 EIF4HQ15056 248 aaKnown RBP4.89□□□□□ -1.63
VPS50-216ENST00000484954 PCOLCEQ15113 449 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 TKFCQ3LXA3 575 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 PIK3R6Q5UE93 754 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 TMEM200BQ69YZ2 307 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 CXXC5Q7LFL8 322 aaKnown RBP4.89□□□□□ -1.63
VPS50-216ENST00000484954 OTOP2Q7RTS6 562 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 FILIP1Q7Z7B0 1213 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 DDX53Q86TM3 631 aaKnown RBP4.89□□□□□ -1.63
VPS50-216ENST00000484954 TAX1BP1Q86VP1 789 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 IFNL2Q8IZJ0 200 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 BCL6BQ8N143 479 aaPredicted RBP4.89□□□□□ -1.63
VPS50-216ENST00000484954 CFHR4Q92496 578 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 MAGEL2Q9UJ55 1249 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 ASB1Q9Y576 335 aa4.89□□□□□ -1.63
VPS50-216ENST00000484954 PTPDC1A2A3K4 754 aa4.88□□□□□ -1.63
VPS50-216ENST00000484954 ASLP04424 464 aa4.88□□□□□ -1.63
VPS50-216ENST00000484954 JMJD7P0C870 316 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms