RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 STRIP1Q5VSL9 837 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 SH3BP5LQ7L8J4 393 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 LRRC57Q8N9N7 239 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 C1orf131Q8NDD1 294 aaKnown RBP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 IFT81Q8WYA0 676 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 SLC35C1Q96A29 364 aa21.52■■□□□ 1.04
LIMS2-215ENST00000484252 EIF2AK1Q9BQI3 630 aaKnown RBP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 PACSIN2Q9UNF0 486 aaPredicted RBP21.52■■□□□ 1.04
LIMS2-215ENST00000484252 KCNK3O14649 394 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 EIF3HO15372 352 aaKnown RBP eCLIP21.51■■□□□ 1.03
LIMS2-215ENST00000484252 GCNT3O95395 438 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 BMP3P12645 472 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 ZNF76P36508 570 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 SLC15A2Q16348 729 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 SHROOM1Q2M3G4 852 aaPredicted RBP21.51■■□□□ 1.03
LIMS2-215ENST00000484252 NLGN1Q8N2Q7 840 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 CASKIN2Q8WXE0 1202 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 CCDC43Q96MW1 224 aaKnown RBP21.51■■□□□ 1.03
LIMS2-215ENST00000484252 TUFT1Q9NNX1 390 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 SIX2Q9NPC8 291 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 TRIM66O15016 1216 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 FERP16591 822 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 CACNB3P54284 484 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 CORO7P57737 925 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 TCERG1LQ5VWI1 586 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 RBM46Q8TBY0 533 aaKnown RBP21.51■■□□□ 1.03
LIMS2-215ENST00000484252 ARL8AQ96BM9 186 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 RUSC1Q9BVN2 902 aa21.51■■□□□ 1.03
LIMS2-215ENST00000484252 PPP1R12BO60237 982 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-215ENST00000484252 H2AFZP0C0S5 128 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 MAGEA9P43362 315 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 NPEPPSP55786 919 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-215ENST00000484252 H2AFVQ71UI9 128 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 KIAA0825Q8IV33 1275 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 SYCE1Q8N0S2 351 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 SCFD2Q8WU76 684 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 MASTLQ96GX5 879 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 GCNT4Q9P109 453 aa21.5■■□□□ 1.03
LIMS2-215ENST00000484252 RSPH10B2B2RC85 870 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 RAD51CO43502 376 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 FAM153BP0C7A2 387 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 RSPH10BP0C881 870 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 RBM5P52756 815 aaKnown RBP eCLIP21.49■■□□□ 1.03
LIMS2-215ENST00000484252 SNAP25P60880 206 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 GNGT1P63211 74 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 CYP4A11Q02928 519 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 CUL1Q13616 776 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 FAM153CQ494X1 144 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 RINT1Q6NUQ1 792 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 TPCN2Q8NHX9 752 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 MKNK1Q9BUB5 465 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 ISCUQ9H1K1 167 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 GEMIN8Q9NWZ8 242 aaKnown RBP21.49■■□□□ 1.03
LIMS2-215ENST00000484252 FAM153AQ9UHL3 310 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 UBE4BO95155 1302 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 EP400Q96L91 3159 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 SLFN11Q7Z7L1 901 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 FMNL3Q8IVF7 1028 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 BORCS6Q96GS4 357 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 TAF1DQ9H5J8 278 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-215ENST00000484252 DBNDD1Q9H9R9 158 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 SERPINA10Q9UK55 444 aa21.49■■□□□ 1.03
LIMS2-215ENST00000484252 ESYT3A0FGR9 886 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 SHTN1A0MZ66 631 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 ZSCAN5CA6NGD5 496 aaPredicted RBP21.48■■□□□ 1.03
LIMS2-215ENST00000484252 CCDC188H7C350 402 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 PGRMC1O00264 195 aaKnown RBP21.48■■□□□ 1.03
LIMS2-215ENST00000484252 OPLAHO14841 1288 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 FAM13AO94988 1023 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 MUTP22033 750 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 PSMC2P35998 433 aaKnown RBP21.48■■□□□ 1.03
LIMS2-215ENST00000484252 HSPA9P38646 679 aaKnown RBP21.48■■□□□ 1.03
LIMS2-215ENST00000484252 STAT1P42224 750 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 CASP4P49662 377 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 DACT2Q5SW24 774 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 RBM26Q5T8P6 1007 aaKnown RBP21.48■■□□□ 1.03
LIMS2-215ENST00000484252 EMC10Q5UCC4 262 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 ICE2Q659A1 982 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 HSD17B14Q9BPX1 270 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 SUCLA2Q9P2R7 463 aaPredicted RBP21.48■■□□□ 1.03
LIMS2-215ENST00000484252 SEL1LQ9UBV2 794 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 DAAM1Q9Y4D1 1078 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 GRIN2DO15399 1336 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 TGFB1I1O43294 461 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 GDF11O95390 407 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 KLHL7Q8IXQ5 586 aa21.48■■□□□ 1.03
LIMS2-215ENST00000484252 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.48■■□□□ 1.03
LIMS2-215ENST00000484252 ATRNL1Q5VV63 1379 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 IGLV3-22A0A075B6J6 115 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 EML1O00423 815 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 CEP104O60308 925 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 ENTPD3O75355 529 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 KDM7AQ6ZMT4 941 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 STXBP4Q6ZWJ1 553 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 FAM186BQ8IYM0 893 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 PIK3R5Q8WYR1 880 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 PLEKHA4Q9H4M7 779 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 PCDHB13Q9Y5F0 798 aa21.47■■□□□ 1.03
LIMS2-215ENST00000484252 COL2A1P02458 1487 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms