RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ANLNQ9NQW6 1124 aa5.45□□□□□ -1.54
PTCD3-214ENST00000483925 ERVK13-1Q9NX77 482 aa5.45□□□□□ -1.54
PTCD3-214ENST00000483925 MKS1Q9NXB0 559 aa5.45□□□□□ -1.54
PTCD3-214ENST00000483925 FBXO2Q9UK22 296 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-214ENST00000483925 FBXL21Q9UKT6 434 aa5.45□□□□□ -1.54
PTCD3-214ENST00000483925 ACSL6Q9UKU0 697 aa5.45□□□□□ -1.54
PTCD3-214ENST00000483925 EMC9Q9Y3B6 208 aa5.45□□□□□ -1.54
PTCD3-214ENST00000483925 IPPQ9Y573 584 aa5.45□□□□□ -1.54
PTCD3-214ENST00000483925 PCDHB12Q9Y5F1 795 aa5.45□□□□□ -1.54
PTCD3-214ENST00000483925 ZNF891A8MT65 544 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 NUDT19A8MXV4 375 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 C9IYK1 514 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 TCERG1O14776 1098 aaKnown RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 PIP5K1CO60331 668 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 CTNND1O60716 968 aaKnown RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 NBNO60934 754 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 ZNF205O95201 554 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 FAM163BP0C2L3 166 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 AKAP5P24588 427 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 KCNJ6P48051 423 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 POU5F1Q01860 360 aaKnown RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 DSG1Q02413 1049 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 SIM2Q14190 667 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 PUM3Q15397 648 aaKnown RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 CYB5RLQ6IPT4 315 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 NXPE1Q8N323 547 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 NUP43Q8NFH3 380 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 DCAF4Q8WV16 495 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 SNRNP27Q8WVK2 155 aaKnown RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 BTN2A2Q8WVV5 523 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 MPP4Q96JB8 637 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 NEUROD6Q96NK8 337 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 GPR101Q96P66 508 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 MKRN2Q9H000 416 aaKnown RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 CSRNP2Q9H175 543 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 EMC7Q9NPA0 242 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 GFOD1Q9NXC2 390 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 C9orf78Q9NZ63 289 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 DDX20Q9UHI6 824 aaKnown RBP5.44□□□□□ -1.54
PTCD3-214ENST00000483925 PGAP2Q9UHJ9 254 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 PCDHA5Q9Y5H7 936 aa5.44□□□□□ -1.54
PTCD3-214ENST00000483925 BLACEA4D250 179 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 F5H423 210 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-214ENST00000483925 FZD9O00144 591 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 TBX1O43435 398 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 BUB1BO60566 1050 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-214ENST00000483925 ITGA4P13612 1032 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 VAV1P15498 845 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 CD247P20963 164 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 CTSKP43235 329 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 KPNA1P52294 538 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-214ENST00000483925 GFRA1P56159 465 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 GUCY1A3Q02108 690 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 AUHQ13825 339 aaKnown RBP5.43□□□□□ -1.54
PTCD3-214ENST00000483925 PDCD2Q16342 344 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-214ENST00000483925 IFIT1BQ5T764 474 aaKnown RBP5.43□□□□□ -1.54
PTCD3-214ENST00000483925 DCAF15Q66K64 600 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 STYK1Q6J9G0 422 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 DRC7Q8IY82 874 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 ARHGEF39Q8N4T4 335 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 CCDC89Q8N998 374 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 SYT8Q8NBV8 401 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 SLC35G2Q8TBE7 412 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 PARD3BQ8TEW8 1205 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 SKA1Q96BD8 255 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 TEPSINQ96N21 525 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 LGR4Q9BXB1 951 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 RNF38Q9H0F5 515 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 FAM204AQ9H8W3 233 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 TNFRSF12AQ9NP84 129 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 AP5S1Q9NUS5 200 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 PRR13Q9NZ81 148 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 PTPN22Q9Y2R2 807 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 PCDHA9Q9Y5H5 950 aa5.43□□□□□ -1.54
PTCD3-214ENST00000483925 ZC3H12DA2A288 527 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 GLRX3O76003 335 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 KCNH1O95259 989 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 SNRPB2P08579 225 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 RHCEP18577 417 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 COPB2P35606 906 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 CEBPAP49715 358 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 RENBPP51606 427 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 NCKAP1LP55160 1127 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 GEMIN4P57678 1058 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 RHDQ02161 417 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 BTKQ06187 659 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 NR1I3Q14994 352 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 NTRK3Q16288 839 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 HYIQ5T013 277 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 RPTNQ6XPR3 784 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 MTDHQ86UE4 582 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 C1orf131Q8NDD1 294 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 TRIM63Q969Q1 353 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 JMJD8Q96S16 334 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 NAA15Q9BXJ9 866 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 CYP26B1Q9NR63 512 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 TRMT13Q9NUP7 481 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 THG1LQ9NWX6 298 aaKnown RBP5.42□□□□□ -1.54
PTCD3-214ENST00000483925 IMPACTQ9P2X3 320 aa5.42□□□□□ -1.54
PTCD3-214ENST00000483925 ZNF451Q9Y4E5 1061 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms