RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 ALDH1B1P30837 517 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 KCNC1P48547 511 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 FXR1P51114 621 aaKnown RBP eCLIP4.8□□□□□ -1.64
LRCH3-217ENST00000483442 HUNKP57058 714 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 CAP1Q01518 475 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 PPP2R5DQ14738 602 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 FBXW10Q5XX13 1052 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 CCDC81Q6ZN84 652 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 FERMT3Q86UX7 667 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 NBPF5PQ86XG9 351 aaPredicted RBP4.8□□□□□ -1.64
LRCH3-217ENST00000483442 RBBP8NLQ8NC74 664 aaPredicted RBP4.8□□□□□ -1.64
LRCH3-217ENST00000483442 SLC17A8Q8NDX2 589 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 FERD3LQ96RJ6 166 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 SPATA25Q9BR10 227 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 HDAC9Q9UKV0 1011 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 PCDHB10Q9UN67 800 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 DUSP10Q9Y6W6 482 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 SCN4AP35499 1836 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 SLX4Q8IY92 1834 aa4.8□□□□□ -1.64
LRCH3-217ENST00000483442 AFDNP55196 1824 aaKnown RBP4.79□□□□□ -1.64
LRCH3-217ENST00000483442 A1BGP04217 495 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 PFKLP17858 780 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 ZNF76P36508 570 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 EFEMP1Q12805 493 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 SULT6B1Q6IMI4 303 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 RGMBQ6NW40 437 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 CYP2R1Q6VVX0 501 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 LIPIQ6XZB0 460 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 ADCY4Q8NFM4 1077 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 NOX5Q96PH1 765 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 SYT3Q9BQG1 590 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 BDH2Q9BUT1 245 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 ADARB2Q9NS39 739 aaKnown RBP4.79□□□□□ -1.64
LRCH3-217ENST00000483442 GPRC5DQ9NZD1 345 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 DICER1Q9UPY3 1922 aaKnown RBP4.79□□□□□ -1.64
LRCH3-217ENST00000483442 FER1L6Q2WGJ9 1857 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 NCAPD2Q15021 1401 aa4.79□□□□□ -1.64
LRCH3-217ENST00000483442 COL5A3P25940 1745 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-217ENST00000483442 KLRG2A4D1S0 409 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-217ENST00000483442 CAMTA2O94983 1202 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 TBC1D8O95759 1140 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 IMPDH2P12268 514 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 L1CAMP32004 1257 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 NOP2P46087 812 aaKnown RBP4.78□□□□□ -1.64
LRCH3-217ENST00000483442 PIP4K2AP48426 406 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-217ENST00000483442 PLP2Q04941 152 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 CXCL9Q07325 125 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 PKN2Q16513 984 aaKnown RBP4.78□□□□□ -1.64
LRCH3-217ENST00000483442 NT5DC1Q5TFE4 455 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 NIM1KQ8IY84 436 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 TTC5Q8N0Z6 440 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 C2orf69Q8N8R5 385 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 RGS22Q8NE09 1264 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 PSMD1Q99460 953 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 GINM1Q9NU53 330 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 SAGE1Q9NXZ1 904 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 PGAP2Q9UHJ9 254 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 RWDD3Q9Y3V2 267 aa4.78□□□□□ -1.64
LRCH3-217ENST00000483442 ZNF831Q5JPB2 1677 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 A0A1W2PQJ5 194 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 SH3D21A4FU49 640 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 STXBP3O00186 592 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 PPIP5K2O43314 1243 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 RAD17O75943 681 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 ADRB1P08588 477 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 ITGA4P13612 1032 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 PMLP29590 882 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 IL6STP40189 918 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 GMPSP49915 693 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 CORO7P57737 925 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 TARBP2Q15633 366 aaKnown RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 DPY19L1Q2PZI1 675 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 DBX2Q6ZNG2 339 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 CPNE8Q86YQ8 564 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 ZNF496Q96IT1 587 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 FGD4Q96M96 766 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 HAUS7Q99871 368 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 POLR3GLQ9BT43 218 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 TEX13AQ9BXU3 409 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 KLHL25Q9H0H3 589 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 GBA2Q9HCG7 927 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 SPATA6Q9NWH7 488 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 CNOT7Q9UIV1 285 aaKnown RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 DDX41Q9UJV9 622 aaKnown RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 NIP7Q9Y221 180 aaKnown RBP eCLIP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 SF3B6Q9Y3B4 125 aaKnown RBP4.77□□□□□ -1.65
LRCH3-217ENST00000483442 PMF1-BGLAPU3KQ54 211 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 ADAMTSL1Q8N6G6 1762 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 LTBP1Q14766 1721 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 NRXN2Q9P2S2 1712 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 ADAMTS7Q9UKP4 1686 aa4.77□□□□□ -1.65
LRCH3-217ENST00000483442 SHTN1A0MZ66 631 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 H7C1D1 291 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 AURKAO14965 403 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 NCAM1P13591 858 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 POU4F1Q01851 419 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 ZFYVE27Q5T4F4 411 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 RCSD1Q6JBY9 416 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 CLEC4GQ6UXB4 293 aa4.76□□□□□ -1.65
LRCH3-217ENST00000483442 KRT26Q7Z3Y9 468 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms