RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 ANO5Q75V66 913 aa18.24■□□□□ 0.51
COL2A1-206ENST00000483376 BANK1Q8NDB2 785 aa18.24■□□□□ 0.51
COL2A1-206ENST00000483376 TRAPPC12Q8WVT3 735 aa18.24■□□□□ 0.51
COL2A1-206ENST00000483376 HERVK_113Q902F9 699 aa18.24■□□□□ 0.51
COL2A1-206ENST00000483376 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.24■□□□□ 0.515e-7■■■□□ 15
COL2A1-206ENST00000483376 POLR3CQ9BUI4 534 aaPredicted RBP18.24■□□□□ 0.51
COL2A1-206ENST00000483376 TUFT1Q9NNX1 390 aa18.24■□□□□ 0.51
COL2A1-206ENST00000483376 PCDH10Q9P2E7 1040 aa18.24■□□□□ 0.51
COL2A1-206ENST00000483376 IGKV6-21A0A0C4DH24 114 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 POTEMA6NI47 508 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 NBNO60934 754 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 XRCC6P12956 609 aaKnown RBP eCLIP18.23■□□□□ 0.51
COL2A1-206ENST00000483376 MBTPS1Q14703 1052 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 SHHQ15465 462 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 C9orf50Q5SZB4 431 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 IER5Q5VY09 327 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 EXOC8Q8IYI6 725 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 ERMNQ8TAM6 284 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 DNAJB3Q8WWF6 145 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 DYDC2Q96IM9 177 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 JPH2Q9BR39 696 aaPredicted RBP18.23■□□□□ 0.51
COL2A1-206ENST00000483376 MTIF3Q9H2K0 278 aaKnown RBP18.23■□□□□ 0.51
COL2A1-206ENST00000483376 RGL1Q9NZL6 768 aa18.23■□□□□ 0.51
COL2A1-206ENST00000483376 WRAP73Q9P2S5 460 aaPredicted RBP18.23■□□□□ 0.51
COL2A1-206ENST00000483376 BAIAP3O94812 1187 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 FGBP02675 491 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 RPA1P27694 616 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 YWHABP31946 246 aaKnown RBP18.22■□□□□ 0.51
COL2A1-206ENST00000483376 TECP42680 631 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 MRPS6P82932 125 aaKnown RBP18.22■□□□□ 0.51
COL2A1-206ENST00000483376 HAUS3Q68CZ6 603 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 ZNF365Q70YC5 407 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 OTUD6AQ7L8S5 288 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 KIAA0319LQ8IZA0 1049 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 USP38Q8NB14 1042 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
COL2A1-206ENST00000483376 SEPT9Q9UHD8 586 aaPredicted RBP18.22■□□□□ 0.51
COL2A1-206ENST00000483376 GAS2O43903 313 aaKnown RBP18.21■□□□□ 0.51
COL2A1-206ENST00000483376 EFCAB14O75071 495 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 MAFO75444 373 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-206ENST00000483376 CHRNA1P02708 482 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 SPATA31C1P0DKV0 1188 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 ACTN1P12814 892 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 TMOD1P28289 359 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 TBC1D8BQ0IIM8 1120 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 BECN1Q14457 450 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 PLEKHG4Q58EX7 1191 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 CNKSR3Q6P9H4 555 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 DTHD1Q6ZMT9 781 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 KCTD17Q8N5Z5 321 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 CYP26B1Q9NR63 512 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 ANKEF1Q9NU02 776 aa18.21■□□□□ 0.51
COL2A1-206ENST00000483376 DDX11L8A8MPP1 907 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 SLC26A4O43511 780 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 ACRP10323 421 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 RFC5P40937 340 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 CDC42EP1Q00587 391 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 CYP4A11Q02928 519 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 CTTNQ14247 550 aaKnown RBP18.2■□□□□ 0.5
COL2A1-206ENST00000483376 CATSPER3Q86XQ3 398 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 TPH2Q8IWU9 490 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 ZBTB10Q96DT7 871 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 RNPC3Q96LT9 517 aaKnown RBP18.2■□□□□ 0.5
COL2A1-206ENST00000483376 DHX33Q9H6R0 707 aaKnown RBP18.2■□□□□ 0.5
COL2A1-206ENST00000483376 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 TRPV2Q9Y5S1 764 aa18.2■□□□□ 0.5
COL2A1-206ENST00000483376 M0QZ92 97 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 MKRN4PQ13434 485 aaPredicted RBP18.19■□□□□ 0.5
COL2A1-206ENST00000483376 IL17AQ16552 155 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 MTERF2Q49AM1 385 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 EFCAB12Q6NXP0 572 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 DEFB128Q7Z7B8 93 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 APBB2Q92870 758 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 AK8Q96MA6 479 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 CELF4Q9BZC1 486 aaKnown RBP18.19■□□□□ 0.5
COL2A1-206ENST00000483376 FAM49AQ9H0Q0 323 aaPredicted RBP18.19■□□□□ 0.5
COL2A1-206ENST00000483376 DBR1Q9UK59 544 aaKnown RBP18.19■□□□□ 0.5
COL2A1-206ENST00000483376 CDY2AQ9Y6F7 541 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
COL2A1-206ENST00000483376 SCN5AQ14524 2016 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 ABHD14A-ACY1A0A1B0GW23 586 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 MED24O75448 989 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 CTSHP09668 335 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 SF3A1Q15459 793 aaKnown RBP18.18■□□□□ 0.5
COL2A1-206ENST00000483376 FBXO47Q5MNV8 452 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 TSHZ1Q6ZSZ6 1077 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 SLC7A3Q8WY07 619 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 NACC1Q96RE7 527 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 MAP7D2Q96T17 732 aa18.18■□□□□ 0.5
COL2A1-206ENST00000483376 FTOQ9C0B1 505 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL2A1-206ENST00000483376 TMEM150BA6NC51 233 aa18.17■□□□□ 0.5
COL2A1-206ENST00000483376 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
COL2A1-206ENST00000483376 RARRES1P49788 294 aa18.17■□□□□ 0.5
COL2A1-206ENST00000483376 CRYBB1P53674 252 aaPredicted RBP18.17■□□□□ 0.5
COL2A1-206ENST00000483376 NPEPPSP55786 919 aa18.17■□□□□ 0.5
COL2A1-206ENST00000483376 SMAD3P84022 425 aaKnown RBP18.17■□□□□ 0.5
COL2A1-206ENST00000483376 PTPAQ15257 358 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms