RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 MAFGO15525 162 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 ZNF76P36508 570 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 CLK2P49760 499 aaKnown RBP15.84■□□□□ 0.13
VARS-226ENST00000483275 ADAM15Q13444 863 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 KIZQ2M2Z5 673 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 SPOUT1Q5T280 376 aaKnown RBP15.84■□□□□ 0.13
VARS-226ENST00000483275 PPP1R18Q6NYC8 613 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 PLA2G4DQ86XP0 818 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 P2RX5Q93086 422 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 NEK1Q96PY6 1258 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 OSMRQ99650 979 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 FTHL17Q9BXU8 183 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
VARS-226ENST00000483275 CLEC1BQ9P126 229 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 ZDBF2Q9HCK1 2354 aa15.84■□□□□ 0.13
VARS-226ENST00000483275 TBKBP1A7MCY6 615 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 PER2O15055 1255 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 NCK2O43639 380 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 VTNP04004 478 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 STAG3L1P0CL83 205 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 FGFR1P11362 822 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 ATP4AP20648 1035 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 SARSP49591 514 aaKnown RBP15.83■□□□□ 0.12
VARS-226ENST00000483275 EXOSC10Q01780 885 aaKnown RBP15.83■□□□□ 0.12
VARS-226ENST00000483275 FAM102BQ5T8I3 360 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 SWSAP1Q6NVH7 229 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 PDXDC2PQ6P474 469 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 ABHD15Q6UXT9 468 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 RNF135Q8IUD6 432 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 KIAA0319LQ8IZA0 1049 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 ATP8B4Q8TF62 1192 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 ZNF668Q96K58 619 aaPredicted RBP15.83■□□□□ 0.12
VARS-226ENST00000483275 MSLNLQ96KJ4 702 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 ADAM2Q99965 735 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 ZNF302Q9NR11 478 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 BARHL2Q9NY43 387 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 KDM3AQ9Y4C1 1321 aa15.83■□□□□ 0.12
VARS-226ENST00000483275 IGLV3-22A0A075B6J6 115 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 IGKV6D-21A0A0A0MT36 114 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 DENND3A2RUS2 1198 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 DHX15O43143 795 aaKnown RBP15.82■□□□□ 0.12
VARS-226ENST00000483275 RPS6KA5O75582 802 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 ATG7O95352 703 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 FOSP01100 380 aaPredicted RBP15.82■□□□□ 0.12
VARS-226ENST00000483275 CKAP2LQ8IYA6 745 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 EFHBQ8N7U6 833 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 VN1R2Q8NFZ6 395 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 RASGRP4Q8TDF6 673 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 ST3GAL5Q9UNP4 418 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 SQORQ9Y6N5 450 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 KMT2EQ8IZD2 1858 aa15.82■□□□□ 0.12
VARS-226ENST00000483275 IPO5O00410 1097 aaKnown RBP15.81■□□□□ 0.12
VARS-226ENST00000483275 HBP1O60381 514 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 C22orf31O95567 290 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 RPLP2P05387 115 aaKnown RBP15.81■□□□□ 0.12
VARS-226ENST00000483275 ADD1P35611 737 aaKnown RBP15.81■□□□□ 0.12
VARS-226ENST00000483275 PBX3P40426 434 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 CLCN3P51790 818 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 APOBRQ0VD83 1088 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 AP3B2Q13367 1082 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 RNF20Q5VTR2 975 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 FAM160B1Q5W0V3 765 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 DHX32Q7L7V1 743 aaKnown RBP15.81■□□□□ 0.12
VARS-226ENST00000483275 FAM228AQ86W67 206 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 METTL13Q8N6R0 699 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 SMRP1Q8NCR6 262 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 FBXL18Q96ME1 805 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 POP1Q99575 1024 aaKnown RBP15.81■□□□□ 0.12
VARS-226ENST00000483275 USP15Q9Y4E8 981 aaPredicted RBP15.81■□□□□ 0.12
VARS-226ENST00000483275 PCDHB7Q9Y5E2 793 aa15.81■□□□□ 0.12
VARS-226ENST00000483275 COL1A2P08123 1366 aa15.8■□□□□ 0.12
VARS-226ENST00000483275 ERVFC1P60507 584 aa15.8■□□□□ 0.12
VARS-226ENST00000483275 NHLH1Q02575 133 aa15.8■□□□□ 0.12
VARS-226ENST00000483275 COLGALT1Q8NBJ5 622 aa15.8■□□□□ 0.12
VARS-226ENST00000483275 MICAL1Q8TDZ2 1067 aa15.8■□□□□ 0.12
VARS-226ENST00000483275 ZNF577Q9BSK1 485 aa15.8■□□□□ 0.12
VARS-226ENST00000483275 APOL5Q9BWW9 433 aa15.8■□□□□ 0.12
VARS-226ENST00000483275 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
VARS-226ENST00000483275 TLE6Q9H808 572 aa15.8■□□□□ 0.12
VARS-226ENST00000483275 C9IYK1 514 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 FGF18O76093 207 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 SP100P23497 879 aaPredicted RBP15.79■□□□□ 0.12
VARS-226ENST00000483275 SLC26A2P50443 739 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 METAP2P50579 478 aaKnown RBP eCLIP15.79■□□□□ 0.126e-7■■■■■ 37.1
VARS-226ENST00000483275 PFKFB3Q16875 520 aaPredicted RBP15.79■□□□□ 0.12
VARS-226ENST00000483275 PRR16Q569H4 304 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 HERC4Q5GLZ8 1057 aaPredicted RBP15.79■□□□□ 0.12
VARS-226ENST00000483275 PLPP4Q5VZY2 271 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 MIS18BP1Q6P0N0 1132 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 NIPA1Q7RTP0 329 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 THNSL1Q8IYQ7 743 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 NME8Q8N427 588 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 LRRC71Q8N4P6 559 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 CRYGNQ8WXF5 182 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 TNPO1Q92973 898 aaKnown RBP15.79■□□□□ 0.12
VARS-226ENST00000483275 PHKBQ93100 1093 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 GJA10Q969M2 543 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 PPP2R3CQ969Q6 453 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 TLR9Q9NR96 1032 aa15.79■□□□□ 0.12
VARS-226ENST00000483275 RGS18Q9NS28 235 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms