RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 RFXAPO00287 272 aa8.8□□□□□ -1
CCNC-204ENST00000482541 IPO5O00410 1097 aaKnown RBP8.8□□□□□ -1
CCNC-204ENST00000482541 DHX15O43143 795 aaKnown RBP8.8□□□□□ -1
CCNC-204ENST00000482541 ARHGEF15O94989 841 aa8.8□□□□□ -1
CCNC-204ENST00000482541 CTSHP09668 335 aa8.8□□□□□ -1
CCNC-204ENST00000482541 USP11P51784 963 aa8.8□□□□□ -1
CCNC-204ENST00000482541 ERVK-21P61565 698 aa8.8□□□□□ -1
CCNC-204ENST00000482541 CCT2P78371 535 aaKnown RBP8.8□□□□□ -1
CCNC-204ENST00000482541 SETQ01105 290 aaPredicted RBP8.8□□□□□ -1
CCNC-204ENST00000482541 TJAP1Q5JTD0 557 aa8.8□□□□□ -1
CCNC-204ENST00000482541 POTEBQ6S5H4 581 aa8.8□□□□□ -1
CCNC-204ENST00000482541 ABHD15Q6UXT9 468 aa8.8□□□□□ -1
CCNC-204ENST00000482541 TMCO2Q7Z6W1 182 aaPredicted RBP8.8□□□□□ -1
CCNC-204ENST00000482541 PACS2Q86VP3 889 aa8.8□□□□□ -1
CCNC-204ENST00000482541 MYOCDQ8IZQ8 938 aa8.8□□□□□ -1
CCNC-204ENST00000482541 NME8Q8N427 588 aa8.8□□□□□ -1
CCNC-204ENST00000482541 DNAJB3Q8WWF6 145 aa8.8□□□□□ -1
CCNC-204ENST00000482541 TGS1Q96RS0 853 aaKnown RBP8.8□□□□□ -1
CCNC-204ENST00000482541 ZNF577Q9BSK1 485 aa8.8□□□□□ -1
CCNC-204ENST00000482541 SLC26A6Q9BXS9 759 aa8.8□□□□□ -1
CCNC-204ENST00000482541 THEGQ9P2T0 379 aa8.8□□□□□ -1
CCNC-204ENST00000482541 PCDHA2Q9Y5H9 948 aa8.8□□□□□ -1
CCNC-204ENST00000482541 SMIM35A0A1B0GVV1 85 aa8.8□□□□□ -1
CCNC-204ENST00000482541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.8□□□□□ -1
CCNC-204ENST00000482541 LINC01553A4QN01 128 aa8.8□□□□□ -1
CCNC-204ENST00000482541 CPLX1O14810 134 aa8.8□□□□□ -1
CCNC-204ENST00000482541 HBP1O60381 514 aa8.8□□□□□ -1
CCNC-204ENST00000482541 IGBP1P78318 339 aa8.8□□□□□ -1
CCNC-204ENST00000482541 MRPS5P82675 430 aaKnown RBP8.8□□□□□ -1
CCNC-204ENST00000482541 SSRP1Q08945 709 aaKnown RBP8.8□□□□□ -1
CCNC-204ENST00000482541 MGAT3Q09327 533 aa8.8□□□□□ -1
CCNC-204ENST00000482541 PLCB4Q15147 1175 aa8.8□□□□□ -1
CCNC-204ENST00000482541 FAM160B1Q5W0V3 765 aa8.8□□□□□ -1
CCNC-204ENST00000482541 MIS18BP1Q6P0N0 1132 aa8.8□□□□□ -1
CCNC-204ENST00000482541 CPLX2Q6PUV4 134 aaKnown RBP8.8□□□□□ -1
CCNC-204ENST00000482541 RUFY4Q6ZNE9 571 aa8.8□□□□□ -1
CCNC-204ENST00000482541 MICAL3Q7RTP6 2002 aa8.8□□□□□ -1
CCNC-204ENST00000482541 ASB2Q96Q27 587 aa8.8□□□□□ -1
CCNC-204ENST00000482541 C22orf23Q9BZE7 217 aa8.8□□□□□ -1
CCNC-204ENST00000482541 OSBPL7Q9BZF2 842 aa8.8□□□□□ -1
CCNC-204ENST00000482541 SUGCTQ9HAC7 445 aa8.8□□□□□ -1
CCNC-204ENST00000482541 NCOA5Q9HCD5 579 aaKnown RBP8.8□□□□□ -1
CCNC-204ENST00000482541 EPOPA6NHQ4 379 aa8.79□□□□□ -1
CCNC-204ENST00000482541 M0QZ92 97 aa8.79□□□□□ -1
CCNC-204ENST00000482541 BACH1O14867 736 aa8.79□□□□□ -1
CCNC-204ENST00000482541 ADAMTS3O15072 1205 aa8.79□□□□□ -1
CCNC-204ENST00000482541 LPXNO60711 386 aa8.79□□□□□ -1
CCNC-204ENST00000482541 EIF5BO60841 1220 aaKnown RBP8.79□□□□□ -1
CCNC-204ENST00000482541 DEXIO95424 95 aa8.79□□□□□ -1
CCNC-204ENST00000482541 CCNE2O96020 404 aa8.79□□□□□ -1
CCNC-204ENST00000482541 NLRP5P59047 1200 aa8.79□□□□□ -1
CCNC-204ENST00000482541 MRPS6P82932 125 aaKnown RBP8.79□□□□□ -1
CCNC-204ENST00000482541 GRB10Q13322 594 aa8.79□□□□□ -1
CCNC-204ENST00000482541 AAK1Q2M2I8 961 aa8.79□□□□□ -1
CCNC-204ENST00000482541 FBXO47Q5MNV8 452 aa8.79□□□□□ -1
CCNC-204ENST00000482541 GALNT17Q6IS24 598 aa8.79□□□□□ -1
CCNC-204ENST00000482541 ZNF746Q6NUN9 644 aaPredicted RBP8.79□□□□□ -1
CCNC-204ENST00000482541 SWSAP1Q6NVH7 229 aa8.79□□□□□ -1
CCNC-204ENST00000482541 FAM117BQ6P1L5 589 aa8.79□□□□□ -1
CCNC-204ENST00000482541 MTHFD1LQ6UB35 978 aa8.79□□□□□ -1
CCNC-204ENST00000482541 TSHZ1Q6ZSZ6 1077 aa8.79□□□□□ -1
CCNC-204ENST00000482541 SMAP1Q8IYB5 467 aaPredicted RBP8.79□□□□□ -1
CCNC-204ENST00000482541 SAMD11Q96NU1 681 aa8.79□□□□□ -1
CCNC-204ENST00000482541 PRDM6Q9NQX0 595 aa8.79□□□□□ -1
CCNC-204ENST00000482541 ZNF302Q9NR11 478 aa8.79□□□□□ -1
CCNC-204ENST00000482541 PDRG1Q9NUG6 133 aa8.79□□□□□ -1
CCNC-204ENST00000482541 VPS54Q9P1Q0 977 aa8.79□□□□□ -1
CCNC-204ENST00000482541 PCDHA10Q9Y5I2 948 aa8.79□□□□□ -1
CCNC-204ENST00000482541 MAFBQ9Y5Q3 323 aaPredicted RBP8.79□□□□□ -1
CCNC-204ENST00000482541 CDY2AQ9Y6F7 541 aa8.79□□□□□ -1
CCNC-204ENST00000482541 CHD9Q3L8U1 2897 aa8.78□□□□□ -1
CCNC-204ENST00000482541 KDM3AQ9Y4C1 1321 aa8.78□□□□□ -1
CCNC-204ENST00000482541 DDX39AO00148 427 aaKnown RBP8.78□□□□□ -1
CCNC-204ENST00000482541 SMAPO00193 183 aa8.78□□□□□ -1
CCNC-204ENST00000482541 ENPP3O14638 875 aa8.78□□□□□ -1
CCNC-204ENST00000482541 PSAPP07602 524 aa8.78□□□□□ -1
CCNC-204ENST00000482541 GHRP10912 638 aa8.78□□□□□ -1
CCNC-204ENST00000482541 KLRC1P26715 233 aa8.78□□□□□ -1
CCNC-204ENST00000482541 ANAPC15P60006 121 aa8.78□□□□□ -1
CCNC-204ENST00000482541 KRT76Q01546 638 aa8.78□□□□□ -1
CCNC-204ENST00000482541 LPIN1Q14693 890 aa8.78□□□□□ -1
CCNC-204ENST00000482541 PRR16Q569H4 304 aa8.78□□□□□ -1
CCNC-204ENST00000482541 ZNF484Q5JVG2 852 aa8.78□□□□□ -1
CCNC-204ENST00000482541 PDXDC2PQ6P474 469 aa8.78□□□□□ -1
CCNC-204ENST00000482541 ATP8B4Q8TF62 1192 aa8.78□□□□□ -1
CCNC-204ENST00000482541 YME1L1Q96TA2 773 aa8.78□□□□□ -1
CCNC-204ENST00000482541 RIT2Q99578 217 aa8.78□□□□□ -1
CCNC-204ENST00000482541 FTHL17Q9BXU8 183 aa8.78□□□□□ -1
CCNC-204ENST00000482541 CELF4Q9BZC1 486 aaKnown RBP8.78□□□□□ -1
CCNC-204ENST00000482541 UPF3BQ9BZI7 483 aaKnown RBP8.78□□□□□ -1
CCNC-204ENST00000482541 TCEAL9Q9UHQ7 104 aa8.78□□□□□ -1
CCNC-204ENST00000482541 PCDHA4Q9UN74 947 aa8.78□□□□□ -1
CCNC-204ENST00000482541 COG5Q9UP83 839 aa8.78□□□□□ -1
CCNC-204ENST00000482541 TRPV2Q9Y5S1 764 aa8.78□□□□□ -1
CCNC-204ENST00000482541 COL1A2P08123 1366 aa8.78□□□□□ -1
CCNC-204ENST00000482541 EYSQ5T1H1 3165 aa8.78□□□□□ -1
CCNC-204ENST00000482541 EDIL3O43854 480 aa8.77□□□□□ -1
CCNC-204ENST00000482541 PPFIA3O75145 1194 aa8.77□□□□□ -1
CCNC-204ENST00000482541 UPP2O95045 317 aa8.77□□□□□ -1
CCNC-204ENST00000482541 CCDC60Q8IWA6 550 aaPredicted RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms