RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PRPF38AQ8NAV1 312 aaKnown RBP13.81□□□□□ -0.2
VPS52-218ENST00000482399 MICAL1Q8TDZ2 1067 aa13.81□□□□□ -0.2
VPS52-218ENST00000482399 ZKSCAN4Q969J2 545 aaPredicted RBP13.81□□□□□ -0.2
VPS52-218ENST00000482399 PRMT1Q99873 361 aaKnown RBP13.81□□□□□ -0.2
VPS52-218ENST00000482399 SPZ1Q9BXG8 430 aa13.81□□□□□ -0.2
VPS52-218ENST00000482399 RAB17Q9H0T7 212 aa13.81□□□□□ -0.2
VPS52-218ENST00000482399 VCPKMTQ9H867 229 aa13.81□□□□□ -0.2
VPS52-218ENST00000482399 MTRF1LQ9UGC7 380 aaKnown RBP13.81□□□□□ -0.2
VPS52-218ENST00000482399 SWAP70Q9UH65 585 aa13.81□□□□□ -0.2
VPS52-218ENST00000482399 ASIC3Q9UHC3 531 aa13.81□□□□□ -0.2
VPS52-218ENST00000482399 RASAL2Q9UJF2 1139 aa13.81□□□□□ -0.2
VPS52-218ENST00000482399 SUFUQ9UMX1 484 aa13.81□□□□□ -0.2
VPS52-218ENST00000482399 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
VPS52-218ENST00000482399 CTTNQ14247 550 aaKnown RBP13.8□□□□□ -0.2
VPS52-218ENST00000482399 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 NSMFQ6X4W1 530 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 NYXQ9GZU5 481 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 NR2E1Q9Y466 385 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 PSMD2Q13200 908 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 SYCE1Q8N0S2 351 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 PROM2Q8N271 834 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 CPP00450 1065 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 SHBGP04278 402 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 GRIPAP1Q4V328 841 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 ZC2HC1CQ53FD0 456 aaPredicted RBP13.8□□□□□ -0.2
VPS52-218ENST00000482399 TRIM68Q6AZZ1 485 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 NEK9Q8TD19 979 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 CHMP6Q96FZ7 201 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.8□□□□□ -0.2
VPS52-218ENST00000482399 L3MBTL1Q9Y468 752 aa13.8□□□□□ -0.2
VPS52-218ENST00000482399 FER1L4A9Z1Z3 1794 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 DNM1LO00429 736 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 NMT1P30419 496 aaKnown RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 HNRNPH3P31942 346 aaKnown RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 SCTRP47872 440 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 ITIH3Q06033 890 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 CALCOCO2Q13137 446 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 SLC29A2Q14542 456 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 SPRED3Q2MJR0 410 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 ZNF662Q6ZS27 426 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 FAM186BQ8IYM0 893 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 NEDD1Q8NHV4 660 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 TPCN2Q8NHX9 752 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 SLC35G2Q8TBE7 412 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 PIK3R5Q8WYR1 880 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 AKAP11Q9UKA4 1901 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 PJA2O43164 708 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 EVI5O60447 810 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 AKAP3O75969 853 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 CFBP00751 764 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 NR3C1P04150 777 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 ELF1P32519 619 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 ZYXQ15942 572 aaKnown RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 TRIM59Q8IWR1 403 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 FBXO25Q8TCJ0 367 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 KCNV2Q8TDN2 545 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 ELMO3Q96BJ8 720 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 RSRC1Q96IZ7 334 aaKnown RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 MXD3Q9BW11 206 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 TAOK3Q9H2K8 898 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 TCEAL9Q9UHQ7 104 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 DNAJC12Q9UKB3 198 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 CEP83Q9Y592 693 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 SPEF2Q9C093 1822 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 COL1A1P02452 1464 aaPredicted RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 A0A1B0GUA9 196 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 MED24O75448 989 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 IFI35P80217 286 aaPredicted RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 BIRC3Q13489 604 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 DRAP1Q14919 205 aaPredicted RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 SF3B3Q15393 1217 aaKnown RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 UAP1Q16222 522 aaPredicted RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 NUGGCQ68CJ6 796 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 RPAINQ86UA6 219 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 CNBD1Q8NA66 436 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 REEP2Q9BRK0 252 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 OSBPL7Q9BZF2 842 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 TPX2Q9ULW0 747 aaKnown RBP13.79□□□□□ -0.2
VPS52-218ENST00000482399 FRMD4BQ9Y2L6 1034 aa13.79□□□□□ -0.2
VPS52-218ENST00000482399 NEFHP12036 1026 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 CYP11B2P19099 503 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 HSPA9P38646 679 aaKnown RBP13.78□□□□□ -0.2
VPS52-218ENST00000482399 DOK7Q18PE1 504 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 KNOP1Q1ED39 458 aaKnown RBP13.78□□□□□ -0.2
VPS52-218ENST00000482399 PPP4R3AQ6IN85 833 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 DAGLBQ8NCG7 672 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 FAM114A2Q9NRY5 505 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 MYH6P13533 1939 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 KDM3AQ9Y4C1 1321 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 A0A1W2PRG0 241 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 PON1P27169 355 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 SMTNP53814 917 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 PMS2P54278 862 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 CCDC50Q8IVM0 306 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 LRRC34Q8IZ02 419 aa13.78□□□□□ -0.2
VPS52-218ENST00000482399 CEP63Q96MT8 703 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms