RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 LPIN1Q14693 890 aa21.09■□□□□ 0.97
HSPG2-210ENST00000481644 FBXO47Q5MNV8 452 aa21.09■□□□□ 0.97
HSPG2-210ENST00000481644 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.09■□□□□ 0.972e-8■■■■■ 28.3
HSPG2-210ENST00000481644 NME8Q8N427 588 aa21.09■□□□□ 0.97
HSPG2-210ENST00000481644 NRBP2Q9NSY0 501 aa21.09■□□□□ 0.97
HSPG2-210ENST00000481644 C22orf31O95567 290 aa21.08■□□□□ 0.97
HSPG2-210ENST00000481644 FOSL2P15408 326 aa21.08■□□□□ 0.97
HSPG2-210ENST00000481644 PPP2R5CQ13362 524 aa21.08■□□□□ 0.97
HSPG2-210ENST00000481644 MKRN4PQ13434 485 aaPredicted RBP21.08■□□□□ 0.97
HSPG2-210ENST00000481644 TSHZ1Q6ZSZ6 1077 aa21.08■□□□□ 0.97
HSPG2-210ENST00000481644 HAS1Q92839 578 aa21.08■□□□□ 0.97
HSPG2-210ENST00000481644 CDH23Q9H251 3354 aa21.08■□□□□ 0.97
HSPG2-210ENST00000481644 VAV3Q9UKW4 847 aa21.08■□□□□ 0.97
HSPG2-210ENST00000481644 GJB5O95377 273 aa21.07■□□□□ 0.96
HSPG2-210ENST00000481644 BAG4O95429 457 aaKnown RBP21.07■□□□□ 0.96
HSPG2-210ENST00000481644 FAM117BQ6P1L5 589 aa21.07■□□□□ 0.96
HSPG2-210ENST00000481644 SLFN12Q8IYM2 578 aa21.07■□□□□ 0.96
HSPG2-210ENST00000481644 KIAA0319LQ8IZA0 1049 aa21.07■□□□□ 0.96
HSPG2-210ENST00000481644 MYOCDQ8IZQ8 938 aa21.07■□□□□ 0.96
HSPG2-210ENST00000481644 METTL13Q8N6R0 699 aa21.07■□□□□ 0.96
HSPG2-210ENST00000481644 CELF4Q9BZC1 486 aaKnown RBP21.07■□□□□ 0.96
HSPG2-210ENST00000481644 PRDM12Q9H4Q4 367 aa21.07■□□□□ 0.96
HSPG2-210ENST00000481644 EML1O00423 815 aa21.06■□□□□ 0.96
HSPG2-210ENST00000481644 MAGEB2O15479 319 aa21.06■□□□□ 0.96
HSPG2-210ENST00000481644 USP38Q8NB14 1042 aa21.06■□□□□ 0.96
HSPG2-210ENST00000481644 BANK1Q8NDB2 785 aa21.06■□□□□ 0.96
HSPG2-210ENST00000481644 FBXO18Q8NFZ0 1043 aa21.06■□□□□ 0.96
HSPG2-210ENST00000481644 SEPT9Q9UHD8 586 aaPredicted RBP21.06■□□□□ 0.96
HSPG2-210ENST00000481644 SQORQ9Y6N5 450 aa21.06■□□□□ 0.96
HSPG2-210ENST00000481644 KDM3AQ9Y4C1 1321 aa21.05■□□□□ 0.96
HSPG2-210ENST00000481644 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.05■□□□□ 0.96
HSPG2-210ENST00000481644 NEMFO60524 1076 aa21.05■□□□□ 0.96
HSPG2-210ENST00000481644 CD2BP2O95400 341 aaKnown RBP21.05■□□□□ 0.96
HSPG2-210ENST00000481644 PSMC5P62195 406 aa21.05■□□□□ 0.96
HSPG2-210ENST00000481644 XKR3Q5GH77 459 aa21.05■□□□□ 0.96
HSPG2-210ENST00000481644 TMX3Q96JJ7 454 aa21.05■□□□□ 0.96
HSPG2-210ENST00000481644 GAS2L1Q99501 681 aaPredicted RBP21.05■□□□□ 0.96
HSPG2-210ENST00000481644 RAD9AQ99638 391 aa21.05■□□□□ 0.96
HSPG2-210ENST00000481644 FOXP1Q9H334 677 aaPredicted RBP21.05■□□□□ 0.96
HSPG2-210ENST00000481644 AGO3Q9H9G7 860 aaKnown RBP21.05■□□□□ 0.96
HSPG2-210ENST00000481644 GINS2Q9Y248 185 aa21.05■□□□□ 0.96
HSPG2-210ENST00000481644 MYO9BQ13459 2157 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 WNT7AO00755 349 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 ATP2B1P20020 1258 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 CD52P31358 61 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 MCM2P49736 904 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 CLCN3P51790 818 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 GNL2Q13823 731 aaKnown RBP21.04■□□□□ 0.96
HSPG2-210ENST00000481644 CALCRLQ16602 461 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 NCAPH2Q6IBW4 605 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 EFCAB12Q6NXP0 572 aa21.04■□□□□ 0.96
HSPG2-210ENST00000481644 LCHNA4D1U4 455 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 ARHGEF15O94989 841 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 TMOD1P28289 359 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 QARSP47897 775 aaKnown RBP21.03■□□□□ 0.96
HSPG2-210ENST00000481644 TAP1Q03518 808 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 TBC1D8BQ0IIM8 1120 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 PAK2Q13177 524 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 MTERF2Q49AM1 385 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 LRRC71Q8N4P6 559 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 TOP1MTQ969P6 601 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 MAP7D2Q96T17 732 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 PPP1R16BQ96T49 567 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 NIFKQ9BYG3 293 aaKnown RBP21.03■□□□□ 0.96
HSPG2-210ENST00000481644 BACH2Q9BYV9 841 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 KIF3AQ9Y496 699 aa21.03■□□□□ 0.96
HSPG2-210ENST00000481644 TMEM150BA6NC51 233 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 DDX11L8A8MPP1 907 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 DKC1O60832 514 aaKnown RBP eCLIP21.02■□□□□ 0.96
HSPG2-210ENST00000481644 UPP2O95045 317 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 STBD1O95210 358 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 VTNP04004 478 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 P4HBP07237 508 aaKnown RBP21.02■□□□□ 0.96
HSPG2-210ENST00000481644 SPIRE1Q08AE8 756 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 EPHA7Q15375 998 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 TARBP2Q15633 366 aaKnown RBP21.02■□□□□ 0.96
HSPG2-210ENST00000481644 KIZQ2M2Z5 673 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 LINC01465Q8N7H1 131 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 MAFAQ8NHW3 353 aaPredicted RBP21.02■□□□□ 0.96
HSPG2-210ENST00000481644 CERS4Q9HA82 394 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 SUGCTQ9HAC7 445 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 CDHR5Q9HBB8 845 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 PADI3Q9ULW8 664 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 PCDHA12Q9UN75 941 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 AKT3Q9Y243 479 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 INSL6Q9Y581 213 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 GTF3C3Q9Y5Q9 886 aa21.02■□□□□ 0.96
HSPG2-210ENST00000481644 COL6A3P12111 3177 aa21.01■□□□□ 0.95
HSPG2-210ENST00000481644 MCM7P33993 719 aa21.01■□□□□ 0.95
HSPG2-210ENST00000481644 NOSTRINQ8IVI9 506 aa21.01■□□□□ 0.95
HSPG2-210ENST00000481644 OSMRQ99650 979 aa21.01■□□□□ 0.95
HSPG2-210ENST00000481644 FTHL17Q9BXU8 183 aa21.01■□□□□ 0.95
HSPG2-210ENST00000481644 TTC12Q9H892 705 aaPredicted RBP21.01■□□□□ 0.95
HSPG2-210ENST00000481644 ENPP3O14638 875 aa21■□□□□ 0.95
HSPG2-210ENST00000481644 RPS6KA5O75582 802 aa21■□□□□ 0.95
HSPG2-210ENST00000481644 TXKP42681 527 aa21■□□□□ 0.95
HSPG2-210ENST00000481644 CRYBB1P53674 252 aaPredicted RBP21■□□□□ 0.95
HSPG2-210ENST00000481644 HTRA4P83105 476 aaPredicted RBP21■□□□□ 0.95
HSPG2-210ENST00000481644 NFX1Q12986 1120 aaKnown RBP21■□□□□ 0.95
HSPG2-210ENST00000481644 TMEM266Q2M3C6 531 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms