RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 SSRP1Q08945 709 aaKnown RBP13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 GPM6BQ13491 265 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 PRR16Q569H4 304 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 NAALADL2Q58DX5 795 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 SWSAP1Q6NVH7 229 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 MOXD1Q6UVY6 613 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 CMTR2Q8IYT2 770 aaKnown RBP13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 CRIPAKQ8N1N5 446 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 DAGLBQ8NCG7 672 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 RDM1Q8NG50 284 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 LENG9Q96B70 501 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 UBE2ZQ9H832 354 aaPredicted RBP13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 PADI3Q9ULW8 664 aa13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
SQSTM1-207ENST00000481335 ZBTB42B2RXF5 422 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 MAGEB2O15479 319 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 CDKL5O76039 1030 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 CTNNB1P35222 781 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 BMPR1AP36894 532 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 JAK3P52333 1124 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 NLRP5P59047 1200 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 CCT2P78371 535 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 COL19A1Q14993 1142 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 PUS10Q3MIT2 529 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 LEXMQ3ZCV2 418 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 CKAP2LQ8IYA6 745 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 BANK1Q8NDB2 785 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 TRAPPC12Q8WVT3 735 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 P2RX5Q93086 422 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 C1orf112Q9NSG2 853 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 PCDHA4Q9UN74 947 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 MYO7AQ13402 2215 aa13.73□□□□□ -0.21
SQSTM1-207ENST00000481335 GPR182O15218 404 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 C22orf31O95567 290 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 ATP4AP20648 1035 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 TMOD1P28289 359 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 ANAPC15P60006 121 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 BTG3Q14201 252 aaPredicted RBP13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 Q4G0T1 1027 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 KIAA0319LQ8IZA0 1049 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 RASGRP4Q8TDF6 673 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 LINC01599Q8WXQ3 324 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 SAMM50Q9Y512 469 aa13.72□□□□□ -0.21
SQSTM1-207ENST00000481335 STK36Q9NRP7 1315 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 CYP3A7-CYP3A51PA0A087WV96 503 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 M0R2N6 131 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 MSH4O15457 936 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 GAS7O60861 476 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 RPS6KA5O75582 802 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 MMP1P03956 469 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 XBP1P17861 261 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 CYP3A7P24462 503 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 SARSP49591 514 aaKnown RBP13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 CRYBB1P53674 252 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 TMEM62Q0P6H9 643 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 TBCKQ8TEA7 893 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 SLC5A5Q92911 643 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 ZBTB10Q96DT7 871 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 PABPC5Q96DU9 382 aaKnown RBP13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 MAP7D2Q96T17 732 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 TEKT3Q9BXF9 490 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 ERVK-5Q9HDB9 667 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 DISC1Q9NRI5 854 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 PDRG1Q9NUG6 133 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 GABBR1Q9UBS5 961 aa13.71□□□□□ -0.21
SQSTM1-207ENST00000481335 ADAMTS3O15072 1205 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 OATP04181 439 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 ANKRD1Q15327 319 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 LRCH2Q5VUJ6 765 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 SLC24A5Q71RS6 500 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 RTN4RL1Q86UN2 441 aaPredicted RBP13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 LINC01465Q8N7H1 131 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 NEK9Q8TD19 979 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 PPP2R3CQ969Q6 453 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 MBOAT7Q96N66 472 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 UPF3BQ9BZI7 483 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 RGS18Q9NS28 235 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 NRBP2Q9NSY0 501 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 LRFN2Q9ULH4 789 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 FAM50BQ9Y247 325 aa13.7□□□□□ -0.22
SQSTM1-207ENST00000481335 DENND3A2RUS2 1198 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 EDIL3O43854 480 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 PSMD10O75832 226 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 CDC42EP1Q00587 391 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 PRKCEQ02156 737 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 NONOQ15233 471 aaKnown RBP eCLIP13.69□□□□□ -0.222e-8■■■■□ 21.7
SQSTM1-207ENST00000481335 KRT25Q7Z3Z0 450 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 RSPH1Q8WYR4 309 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 NAP1L4Q99733 375 aaKnown RBP13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 TMX1Q9H3N1 280 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 ELAC1Q9H777 363 aaKnown RBP13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 PPP4R2Q9NY27 417 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 NOC2LQ9Y3T9 749 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms