RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 A0A1W2PQ27 194 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 A0A1W2PQ64 194 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 A0A1W2PQC6 194 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 A0A1W2PQD8 194 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 C6orf222P0C671 652 aaPredicted RBP8.86□□□□□ -0.99
CBX3-206ENST00000481057 LCP1P13796 627 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 PNLIPP16233 465 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 SIRT2Q8IXJ6 389 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 DCAF4Q8WV16 495 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 INTS4Q96HW7 963 aaKnown RBP8.86□□□□□ -0.99
CBX3-206ENST00000481057 PDLIM7Q9NR12 457 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 GULP1Q9UBP9 304 aa8.86□□□□□ -0.99
CBX3-206ENST00000481057 ZNF503-AS2A6NEH8 195 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 RFC4P35249 363 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 RBM10P98175 930 aaKnown RBP8.85□□□□□ -0.99
CBX3-206ENST00000481057 CYP4F8P98187 520 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 STYK1Q6J9G0 422 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 GIMAP6Q6P9H5 292 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 RSPO2Q6UXX9 243 aaPredicted RBP8.85□□□□□ -0.99
CBX3-206ENST00000481057 DPF3Q92784 378 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 PHF20Q9BVI0 1012 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 SLC6A17Q9H1V8 727 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 GPR27Q9NS67 375 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 RWDD3Q9Y3V2 267 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.85□□□□□ -0.99
CBX3-206ENST00000481057 FER1L6Q2WGJ9 1857 aa8.85□□□□□ -0.99
CBX3-206ENST00000481057 HTTP42858 3142 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 CCDC163A0A0D9SF12 145 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 ESYT3A0FGR9 886 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 PPP1R11O60927 126 aaPredicted RBP8.84□□□□□ -0.99
CBX3-206ENST00000481057 TACR1P25103 407 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 HUNKP57058 714 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 RPL11P62913 178 aaKnown RBP8.84□□□□□ -0.99
CBX3-206ENST00000481057 ITPK1Q13572 414 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 ZCRB1Q8TBF4 217 aaKnown RBP8.84□□□□□ -0.99
CBX3-206ENST00000481057 MTA3Q9BTC8 594 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 TNFRSF12AQ9NP84 129 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 FBLN5Q9UBX5 448 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 FBXL7Q9UJT9 491 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 TIMM13Q9Y5L4 95 aaPredicted RBP8.84□□□□□ -0.99
CBX3-206ENST00000481057 EYSQ5T1H1 3165 aa8.84□□□□□ -0.99
CBX3-206ENST00000481057 RPTORQ8N122 1335 aa8.83□□□□□ -1
CBX3-206ENST00000481057 MYO1BO43795 1136 aa8.83□□□□□ -1
CBX3-206ENST00000481057 ARL4AP40617 200 aa8.83□□□□□ -1
CBX3-206ENST00000481057 ERVFRD-1P60508 538 aa8.83□□□□□ -1
CBX3-206ENST00000481057 KCNT2Q6UVM3 1135 aa8.83□□□□□ -1
CBX3-206ENST00000481057 MAMDC2Q7Z304 686 aaPredicted RBP8.83□□□□□ -1
CBX3-206ENST00000481057 NLRP10Q86W26 655 aa8.83□□□□□ -1
CBX3-206ENST00000481057 LZTR1Q8N653 840 aa8.83□□□□□ -1
CBX3-206ENST00000481057 ZFYVE21Q9BQ24 234 aa8.83□□□□□ -1
CBX3-206ENST00000481057 CDK19Q9BWU1 502 aa8.83□□□□□ -1
CBX3-206ENST00000481057 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.83□□□□□ -18e-7■■■■□ 22.4
CBX3-206ENST00000481057 MSCO60682 206 aa8.82□□□□□ -1
CBX3-206ENST00000481057 GTF2A2P52657 109 aa8.82□□□□□ -1
CBX3-206ENST00000481057 GABREP78334 506 aa8.82□□□□□ -1
CBX3-206ENST00000481057 RGMBQ6NW40 437 aa8.82□□□□□ -1
CBX3-206ENST00000481057 IRF2BP1Q8IU81 584 aa8.82□□□□□ -1
CBX3-206ENST00000481057 Q8N1Y9 231 aa8.82□□□□□ -1
CBX3-206ENST00000481057 PTPRN2Q92932 1015 aa8.82□□□□□ -1
CBX3-206ENST00000481057 LIN37Q96GY3 246 aaPredicted RBP8.82□□□□□ -1
CBX3-206ENST00000481057 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.82□□□□□ -1
CBX3-206ENST00000481057 MARCH2Q9P0N8 246 aa8.82□□□□□ -1
CBX3-206ENST00000481057 PCDHA2Q9Y5H9 948 aa8.82□□□□□ -1
CBX3-206ENST00000481057 POLRMTO00411 1230 aaKnown RBP8.81□□□□□ -1
CBX3-206ENST00000481057 BCL6P41182 706 aa8.81□□□□□ -1
CBX3-206ENST00000481057 GPR85P60893 370 aa8.81□□□□□ -1
CBX3-206ENST00000481057 ADGRF1Q5T601 910 aa8.81□□□□□ -1
CBX3-206ENST00000481057 C2CD5Q86YS7 1000 aa8.81□□□□□ -1
CBX3-206ENST00000481057 TEX2Q8IWB9 1127 aa8.81□□□□□ -1
CBX3-206ENST00000481057 PLEKHO2Q8TD55 490 aa8.81□□□□□ -1
CBX3-206ENST00000481057 NCOA5Q9HCD5 579 aaKnown RBP8.81□□□□□ -1
CBX3-206ENST00000481057 TMA7Q9Y2S6 64 aaKnown RBP8.81□□□□□ -1
CBX3-206ENST00000481057 TRAF6Q9Y4K3 522 aa8.81□□□□□ -1
CBX3-206ENST00000481057 DLEC1Q9Y238 1755 aa8.81□□□□□ -1
CBX3-206ENST00000481057 TLDC2A0PJX2 215 aa8.8□□□□□ -1
CBX3-206ENST00000481057 H0YIN7 160 aa8.8□□□□□ -1
CBX3-206ENST00000481057 SRGAP3O43295 1099 aa8.8□□□□□ -1
CBX3-206ENST00000481057 SDHBP21912 280 aa8.8□□□□□ -1
CBX3-206ENST00000481057 LSAMPQ13449 338 aa8.8□□□□□ -1
CBX3-206ENST00000481057 TRIM61Q5EBN2 209 aa8.8□□□□□ -1
CBX3-206ENST00000481057 BICRALQ6AI39 1079 aa8.8□□□□□ -1
CBX3-206ENST00000481057 MPZL3Q6UWV2 235 aa8.8□□□□□ -1
CBX3-206ENST00000481057 HOMER1Q86YM7 354 aa8.8□□□□□ -1
CBX3-206ENST00000481057 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.8□□□□□ -1
CBX3-206ENST00000481057 MRPL4Q9BYD3 311 aaKnown RBP8.8□□□□□ -1
CBX3-206ENST00000481057 FANCLQ9NW38 375 aa8.8□□□□□ -1
CBX3-206ENST00000481057 PRUNE2Q8WUY3 3088 aa8.8□□□□□ -1
CBX3-206ENST00000481057 TTC21AQ8NDW8 1320 aa8.8□□□□□ -1
CBX3-206ENST00000481057 A0A1W2PQJ5 194 aa8.79□□□□□ -1
CBX3-206ENST00000481057 OR14I1A6ND48 311 aa8.79□□□□□ -1
CBX3-206ENST00000481057 FUCA1P04066 466 aa8.79□□□□□ -1
CBX3-206ENST00000481057 DBHP09172 617 aa8.79□□□□□ -1
CBX3-206ENST00000481057 GLI4P10075 376 aa8.79□□□□□ -1
CBX3-206ENST00000481057 FPR2P25090 351 aa8.79□□□□□ -1
CBX3-206ENST00000481057 PDE6BP35913 854 aa8.79□□□□□ -1
CBX3-206ENST00000481057 EPS15P42566 896 aa8.79□□□□□ -1
CBX3-206ENST00000481057 FAM50AQ14320 339 aaKnown RBP8.79□□□□□ -1
CBX3-206ENST00000481057 LBX2Q6XYB7 198 aa8.79□□□□□ -1
CBX3-206ENST00000481057 USP50Q70EL3 339 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms