RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CACNB2Q08289 660 aaPredicted RBP7.77□□□□□ -1.17
LRCH3-216ENST00000481048 FAAP100Q0VG06 881 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 COG2Q14746 738 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 MFSD14CQ5VZR4 134 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 SMYD4Q8IYR2 804 aaPredicted RBP7.77□□□□□ -1.17
LRCH3-216ENST00000481048 MB21D1Q8N884 522 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 DIS3LQ8TF46 1054 aaKnown RBP7.77□□□□□ -1.17
LRCH3-216ENST00000481048 FAM129BQ96TA1 746 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 GDF15Q99988 308 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 PAGR1Q9BTK6 254 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 PORCNQ9H237 461 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 CWC22Q9HCG8 908 aaKnown RBP7.77□□□□□ -1.17
LRCH3-216ENST00000481048 ATP8A2Q9NTI2 1148 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 ZBTB40Q9NUA8 1239 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 MCM9Q9NXL9 1143 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 STAP2Q9UGK3 403 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 IVNS1ABPQ9Y6Y0 642 aa7.77□□□□□ -1.17
LRCH3-216ENST00000481048 PARP14Q460N5 1801 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 TCRBV5S4A2TA0A5A2 114 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 ZNF862O60290 1169 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 CNMDO75829 334 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 CD8BP10966 210 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 COL6A1P12109 1028 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 ATP5JP18859 108 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 SHMT1P34896 483 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 ATP2B2Q01814 1243 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 GRB14Q14449 540 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 SHROOM1Q2M3G4 852 aaPredicted RBP7.76□□□□□ -1.17
LRCH3-216ENST00000481048 ZNF648Q5T619 568 aaPredicted RBP7.76□□□□□ -1.17
LRCH3-216ENST00000481048 DIEXFQ68CQ4 756 aaKnown RBP7.76□□□□□ -1.17
LRCH3-216ENST00000481048 B4GALNT3Q6L9W6 998 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 TMEM179Q6ZVK1 233 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 SHCBP1Q8NEM2 672 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 ACER1Q8TDN7 264 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 PANK1Q8TE04 598 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 LPAR1Q92633 364 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 CCDC17Q96LX7 622 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.76□□□□□ -1.17
LRCH3-216ENST00000481048 SH2D4AQ9H788 454 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 IL1RAPL2Q9NP60 686 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 DCP1AQ9NPI6 582 aaPredicted RBP7.76□□□□□ -1.17
LRCH3-216ENST00000481048 DISC1Q9NRI5 854 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 SLC5A4Q9NY91 659 aa7.76□□□□□ -1.17
LRCH3-216ENST00000481048 COL11A1P12107 1806 aaPredicted RBP7.75□□□□□ -1.17
LRCH3-216ENST00000481048 PLXNA1Q9UIW2 1896 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 EIF1AYO14602 144 aaKnown RBP7.75□□□□□ -1.17
LRCH3-216ENST00000481048 RNGTTO60942 597 aaKnown RBP7.75□□□□□ -1.17
LRCH3-216ENST00000481048 IGHA2P01877 340 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 FUT4P22083 530 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 GUCY1A2P33402 732 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 ADD2P35612 726 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 SEPT2Q15019 361 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 ZYXQ15942 572 aaKnown RBP7.75□□□□□ -1.17
LRCH3-216ENST00000481048 LRIT3Q3SXY7 679 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 ZSCAN25Q6NSZ9 544 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 AMOTL1Q8IY63 956 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 C7orf61Q8IZ16 206 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 ABRAQ8N0Z2 381 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 KRTAP4-7Q9BYR0 210 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 NIF3L1Q9GZT8 377 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 RPAP3Q9H6T3 665 aaPredicted RBP7.75□□□□□ -1.17
LRCH3-216ENST00000481048 RC3H2Q9HBD1 1191 aaKnown RBP7.75□□□□□ -1.17
LRCH3-216ENST00000481048 PAG1Q9NWQ8 432 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
LRCH3-216ENST00000481048 ZNF236Q9UL36 1845 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 PFASO15067 1338 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 ZNF532Q9HCE3 1301 aa7.75□□□□□ -1.17
LRCH3-216ENST00000481048 GOLIM4O00461 696 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 MPHOSPH10O00566 681 aaKnown RBP7.74□□□□□ -1.17
LRCH3-216ENST00000481048 PEX10O60683 326 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 SLC25A27O95847 323 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 GSTP1P09211 210 aaKnown RBP7.74□□□□□ -1.17
LRCH3-216ENST00000481048 CCND3P30281 292 aaPredicted RBP7.74□□□□□ -1.17
LRCH3-216ENST00000481048 CD96P40200 585 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 GRM2Q14416 872 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 TTLL4Q14679 1199 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 UBE3CQ15386 1083 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 CCL14Q16627 93 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 OLFML2BQ68BL8 750 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 DPP9Q86TI2 863 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 ATG4DQ86TL0 474 aaPredicted RBP7.74□□□□□ -1.17
LRCH3-216ENST00000481048 SIRT2Q8IXJ6 389 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 ARRDC4Q8NCT1 418 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 SDR42E1Q8WUS8 393 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 CITED4Q96RK1 184 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 DNAJC2Q99543 621 aaKnown RBP7.74□□□□□ -1.17
LRCH3-216ENST00000481048 HAUS7Q99871 368 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 SPATC1LQ9H0A9 340 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 MROH8Q9H579 483 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 BTBD7Q9P203 1132 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 DDX20Q9UHI6 824 aaKnown RBP7.74□□□□□ -1.17
LRCH3-216ENST00000481048 VAV3Q9UKW4 847 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 TMX2Q9Y320 296 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 U3KQE9 123 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 MYH4Q9Y623 1939 aa7.74□□□□□ -1.17
LRCH3-216ENST00000481048 CUL9Q8IWT3 2517 aa7.73□□□□□ -1.17
LRCH3-216ENST00000481048 A0A1W2PRG0 241 aa7.73□□□□□ -1.17
LRCH3-216ENST00000481048 DNM1LO00429 736 aa7.73□□□□□ -1.17
LRCH3-216ENST00000481048 WDR46O15213 610 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms