RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 MCPH1Q8NEM0 835 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 FOXP2O15409 715 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 BMP3P12645 472 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
VEGFA-212ENST00000480614 UBE2TQ9NPD8 197 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-212ENST00000480614 CHCHD3Q9NX63 227 aaKnown RBP10.21□□□□□ -0.77
VEGFA-212ENST00000480614 ESRRAP11474 423 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-212ENST00000480614 TSPY1Q01534 308 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.77
VEGFA-212ENST00000480614 APOBEC2Q9Y235 224 aaKnown RBP10.21□□□□□ -0.77
VEGFA-212ENST00000480614 E2F6O75461 281 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 PEX19P40855 299 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 CHRNDQ07001 517 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 NNTQ13423 1086 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 SDR42E1Q8WUS8 393 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 TOPORSQ9NS56 1045 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-212ENST00000480614 PI4KBQ9UBF8 816 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 PCDHA13Q9Y5I0 950 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 ASAP2O43150 1006 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 MAP3K7CLP57077 242 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 GOLGA8JA6NMD2 632 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 KRT7P08729 469 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 PLA2G4BP0C869 781 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 LRRC23Q53EV4 343 aaPredicted RBP10.21□□□□□ -0.78
VEGFA-212ENST00000480614 C16orf87Q6PH81 154 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 ARHGAP27Q6ZUM4 889 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 POTEB3A0JP26 581 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 NCF2P19878 526 aaPredicted RBP10.21□□□□□ -0.78
VEGFA-212ENST00000480614 TBXAS1P24557 533 aaPredicted RBP10.21□□□□□ -0.78
VEGFA-212ENST00000480614 APOA5Q6Q788 366 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 POTEBQ6S5H4 581 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 WDR75Q8IWA0 830 aaKnown RBP10.21□□□□□ -0.78
VEGFA-212ENST00000480614 SLC35F6Q8N357 371 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 DDX50Q9BQ39 737 aaKnown RBP10.21□□□□□ -0.78
VEGFA-212ENST00000480614 COG4Q9H9E3 785 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 COPB2P35606 906 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 DYNLT1P63172 113 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 PPARDQ03181 441 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 BBS9Q3SYG4 887 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 KCTD16Q68DU8 428 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 CDC42BPAQ5VT25 1732 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 BTBD18B2RXH4 712 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 HSPA4LO95757 839 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 IL6STP40189 918 aaPredicted RBP10.21□□□□□ -0.78
VEGFA-212ENST00000480614 PATL1Q86TB9 770 aaKnown RBP10.21□□□□□ -0.78
VEGFA-212ENST00000480614 ASNSD1Q9NWL6 643 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 GTPBP10A4D1E9 387 aaKnown RBP10.21□□□□□ -0.78
VEGFA-212ENST00000480614 URGCPQ8TCY9 931 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 ARHGAP26Q9UNA1 814 aa10.21□□□□□ -0.78
VEGFA-212ENST00000480614 NOP53Q9NZM5 478 aaKnown RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 ZBBXA8MT70 800 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 HNRNPRO43390 633 aaKnown RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 SEMA3FQ13275 785 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 ITPRIPL1Q6GPH6 555 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 TRIM72Q6ZMU5 477 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 ITM2BQ9Y287 266 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 LDHAP00338 332 aaKnown RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 MYBL1P10243 752 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 MAGEA9P43362 315 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 PTPROQ16827 1216 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 WASHC5Q12768 1159 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 TFDP2Q14188 446 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 TOGARAM2Q6ZUX3 1019 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 LGR6Q9HBX8 967 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 ARHGAP10A1A4S6 786 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 OCM2P0CE71 109 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 OCMP0CE72 109 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 EIF4A3P38919 411 aaKnown RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 LIFRP42702 1097 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 COPS2P61201 443 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 RWDD4Q6NW29 188 aaKnown RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 CLIC6Q96NY7 704 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 STAP2Q9UGK3 403 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 COPEO14579 308 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 LAMB3Q13751 1172 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 ZC3H18Q86VM9 953 aaKnown RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 ACAP3Q96P50 834 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 SLAIN2Q9P270 581 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 COPG1Q9Y678 874 aaKnown RBP10.2□□□□□ -0.78
VEGFA-212ENST00000480614 NDUFB9Q9Y6M9 179 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 PIK3R2O00459 728 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 CAPN11Q9UMQ6 739 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 APOA1P02647 267 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 PHKA2P46019 1235 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 FAF2Q96CS3 445 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 DTNBP1Q96EV8 351 aa10.2□□□□□ -0.78
VEGFA-212ENST00000480614 ZFXP17010 805 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 TMPRSS15P98073 1019 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 FAM133AQ8N9E0 248 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 UHMK1Q8TAS1 419 aaKnown RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 MAP4K1Q92918 833 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PLCG1P19174 1290 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 SYT2Q8N9I0 419 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-212ENST00000480614 ADGRL3Q9HAR2 1447 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 PZPP20742 1482 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 CHUKO15111 745 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 DDIT3P35638 169 aa10.19□□□□□ -0.78
VEGFA-212ENST00000480614 ZNF667Q5HYK9 610 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms