RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 MYH7BA7E2Y1 1941 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 A0A0A6YYK5 440 aaPredicted RBP9.48□□□□□ -0.89
PKP4-210ENST00000480171 H0YHG0 523 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 KRIT1O00522 736 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 TBX3O15119 743 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 SLC16A3O15427 465 aaKnown RBP9.48□□□□□ -0.89
PKP4-210ENST00000480171 MEFVO15553 781 aaPredicted RBP9.48□□□□□ -0.89
PKP4-210ENST00000480171 MED24O75448 989 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 FERP16591 822 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 ERVK-9P63128 1117 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 GTF2IP78347 998 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 GUCY1A3Q02108 690 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 BIRC3Q13489 604 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 ARSHQ5FYA8 562 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 DCAF17Q5H9S7 520 aaPredicted RBP9.48□□□□□ -0.89
PKP4-210ENST00000480171 PRR5LQ6MZQ0 368 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 MAMSTRQ6ZN01 415 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 CLEC10AQ8IUN9 316 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 TBC1D16Q8TBP0 767 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 CERKQ8TCT0 537 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 ZNF473Q8WTR7 871 aaKnown RBP9.48□□□□□ -0.89
PKP4-210ENST00000480171 MBOAT7Q96N66 472 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 KDM4CQ9H3R0 1056 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 CENPHQ9H3R5 247 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 SLITRK6Q9H5Y7 841 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 FBXL5Q9UKA1 691 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 PCDHA1Q9Y5I3 950 aa9.48□□□□□ -0.89
PKP4-210ENST00000480171 POTEFA5A3E0 1075 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L15C9J2P7 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L13C9JLJ4 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L11C9JVI0 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L18D6R9N7 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L22D6RA61 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L17D6RBQ6 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L19D6RCP7 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L20D6RJB6 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 PARNO95453 639 aaKnown RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 POTEIP0CG38 1075 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 PON1P27169 355 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 CTNNA1P35221 906 aaKnown RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 HSD17B3P37058 310 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L24Q0WX57 530 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 GIT2Q14161 759 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP17L6PQ6QN14 398 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 YTHDF3Q7Z739 585 aaKnown RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 NLRP14Q86W24 1093 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 SYT2Q8N9I0 419 aaPredicted RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 LRRC57Q8N9N7 239 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 TPCN2Q8NHX9 752 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 PMM1Q92871 262 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 CCDC17Q96LX7 622 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 TYW1Q9NV66 732 aaKnown RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 USP40Q9NVE5 1235 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 SUCLA2Q9P2R7 463 aaPredicted RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 GGA2Q9UJY4 613 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 NOC2LQ9Y3T9 749 aaKnown RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 FOCADQ5VW36 1801 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 SART1O43290 800 aaKnown RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 PPP1R12BO60237 982 aaPredicted RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 TBCAO75347 108 aaKnown RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 GFPT2O94808 682 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 RPA1P27694 616 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 STAT3P40763 770 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 CDR1P51861 262 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 NPEPPSP55786 919 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 ITGB3BPQ13352 177 aaPredicted RBP9.47□□□□□ -0.89
PKP4-210ENST00000480171 QRICH1Q2TAL8 776 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 NAA35Q5VZE5 725 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 PTF1AQ7RTS3 328 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 SFR1Q86XK3 245 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 FMNL3Q8IVF7 1028 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 UIMC1Q96RL1 719 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 CCT8L2Q96SF2 557 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 KIF13BQ9NQT8 1826 aa9.47□□□□□ -0.89
PKP4-210ENST00000480171 GTPBP10A4D1E9 387 aaKnown RBP9.46□□□□□ -0.89
PKP4-210ENST00000480171 UBAP1LF5GYI3 381 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 CREB3O43889 395 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 FAM107AO95990 144 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 NR3C1P04150 777 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 SHMT1P34896 483 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 PDE6BP35913 854 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 STAT1P42224 750 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 PABPC4Q13310 644 aaKnown RBP eCLIP9.46□□□□□ -0.895e-7■■□□□ 13.2
PKP4-210ENST00000480171 EPHA7Q15375 998 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 TRADDQ15628 312 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 CRY2Q49AN0 593 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 ODF2Q5BJF6 829 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 FAM182BQ5T319 152 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 EPM2AIP1Q7L775 607 aaPredicted RBP9.46□□□□□ -0.89
PKP4-210ENST00000480171 CATSPER3Q86XQ3 398 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 METTL13Q8N6R0 699 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 DCAF4Q8WV16 495 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 FAM20AQ96MK3 541 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 AP1M1Q9BXS5 423 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 FAM114A2Q9NRY5 505 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 AMFRQ9UKV5 643 aa9.46□□□□□ -0.89
PKP4-210ENST00000480171 CAPN7Q9Y6W3 813 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms