RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 EIF2AK2P19525 551 aaKnown RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 RPL13P26373 211 aaKnown RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 COG2Q14746 738 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 SLC9C1Q4G0N8 1177 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 CC2D1AQ6P1N0 951 aaPredicted RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 ZNF720Q7Z2F6 126 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 ZKSCAN4Q969J2 545 aaPredicted RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 NUCKS1Q9H1E3 243 aaKnown RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 GINM1Q9NU53 330 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 SLC16A3O15427 465 aaKnown RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 SERPING1P05155 500 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 ARID5AQ03989 594 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 RAPGEF1Q13905 1077 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 BMS1Q14692 1282 aaKnown RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 ODR4Q5SWX8 454 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 TCERG1LQ5VWI1 586 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 FAM178BQ8IXR5 827 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 NOA1Q8NC60 698 aaKnown RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 SLC35C1Q96A29 364 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 PNKPQ96T60 521 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 AGO4Q9HCK5 861 aaKnown RBP14.29□□□□□ -0.12
SEC13-216ENST00000479868 KCND2Q9NZV8 630 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 SALL4Q9UJQ4 1053 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 ODF2LQ9ULJ1 636 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 PCDHB13Q9Y5F0 798 aa14.29□□□□□ -0.12
SEC13-216ENST00000479868 ANO9A1A5B4 782 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 ARHGEF35A5YM69 484 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 MOCS3O95396 460 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 EPB41P11171 864 aaKnown RBP14.28□□□□□ -0.12
SEC13-216ENST00000479868 MAGEA1P43355 309 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 MAPK7Q13164 816 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 MTMR1Q13613 665 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 PGM5Q15124 567 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 NIPA1Q7RTP0 329 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 DAW1Q8N136 415 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 KRT222Q8N1A0 295 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 FAM133AQ8N9E0 248 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 BORCS6Q96GS4 357 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 JADE2Q9NQC1 790 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 SEL1LQ9UBV2 794 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 ZHX2Q9Y6X8 837 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 ZNF541Q9H0D2 1346 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
SEC13-216ENST00000479868 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 VWA5AO00534 786 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 HIP1RO75146 1068 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 RHOXF2BP0C7M4 288 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 GUCY2CP25092 1073 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 PON1P27169 355 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 EXOC3L4Q17RC7 722 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 MSANTD4Q8NCY6 345 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 TRIM58Q8NG06 486 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 NEK9Q8TD19 979 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 CAPZA3Q96KX2 299 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 MMS19Q96T76 1030 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 RHOXF2Q9BQY4 288 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 METTL14Q9HCE5 456 aaKnown RBP14.27□□□□□ -0.12
SEC13-216ENST00000479868 PRDM10Q9NQV6 1147 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 AIPL1Q9NZN9 384 aa14.27□□□□□ -0.12
SEC13-216ENST00000479868 COL11A1P12107 1806 aaPredicted RBP14.27□□□□□ -0.12
SEC13-216ENST00000479868 ZNF185O15231 689 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 PJA2O43164 708 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 P4HBP07237 508 aaKnown RBP14.27□□□□□ -0.13
SEC13-216ENST00000479868 UCHL3P15374 230 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 USP14P54578 494 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 BACE1P56817 501 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 ENOX2Q16206 610 aaKnown RBP14.27□□□□□ -0.13
SEC13-216ENST00000479868 SCYL3Q8IZE3 742 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 WRNIP1Q96S55 665 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 PLCB1Q9NQ66 1216 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 SAMM50Q9Y512 469 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 RIPK3Q9Y572 518 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 CTDP1Q9Y5B0 961 aaPredicted RBP14.27□□□□□ -0.13
SEC13-216ENST00000479868 RLFQ13129 1914 aa14.27□□□□□ -0.13
SEC13-216ENST00000479868 ZBED4O75132 1171 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 SASH3O75995 380 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 TBC1D8O95759 1140 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 MYCLP12524 364 aaPredicted RBP14.26□□□□□ -0.13
SEC13-216ENST00000479868 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
SEC13-216ENST00000479868 KLHDC7AQ5VTJ3 777 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 PADI6Q6TGC4 694 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 NSMFQ6X4W1 530 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 RNF207Q6ZRF8 634 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 MAEAQ7L5Y9 396 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 DRC1Q96MC2 740 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 MAP3K20Q9NYL2 800 aaKnown RBP14.26□□□□□ -0.13
SEC13-216ENST00000479868 ZNF112Q9UJU3 913 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 CCDC151A5D8V7 595 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 ATP9AO75110 1047 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 TACC1O75410 805 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 PTPRAP18433 802 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 KLHL30Q0D2K2 578 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 NFIL3Q16649 462 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 DCAF15Q66K64 600 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 FAM186BQ8IYM0 893 aa14.26□□□□□ -0.13
SEC13-216ENST00000479868 RMDN3Q96TC7 470 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms