RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 PCDHB12Q9Y5F1 795 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 ZNF318Q5VUA4 2279 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 C5orf42Q9H799 3197 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 hCG_1642624A0A1W2PR95 340 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 ESYT2A0FGR8 921 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 SMCO2A6NFE2 343 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 C9IYK1 514 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 DHX15O43143 795 aaKnown RBP15.14■□□□□ 0.01
ABCF1-206ENST00000479542 RPS6KA5O75582 802 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 GTF2F1P35269 517 aaKnown RBP eCLIP15.14■□□□□ 0.01
ABCF1-206ENST00000479542 NDUFV1P49821 464 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 ADCY7P51828 1080 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 CRYBB1P53674 252 aaPredicted RBP15.14■□□□□ 0.01
ABCF1-206ENST00000479542 NAPAP54920 295 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 NHLH1Q02575 133 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 COL9A3Q14050 684 aaPredicted RBP15.14■□□□□ 0.01
ABCF1-206ENST00000479542 HFE2Q6ZVN8 426 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 DHX32Q7L7V1 743 aaKnown RBP15.14■□□□□ 0.01
ABCF1-206ENST00000479542 MICU3Q86XE3 530 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 BBXQ8WY36 941 aaPredicted RBP15.14■□□□□ 0.01
ABCF1-206ENST00000479542 FBXL18Q96ME1 805 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 NEK1Q96PY6 1258 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 IGFLR1Q9H665 355 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 PKD2L1Q9P0L9 805 aa15.14■□□□□ 0.01
ABCF1-206ENST00000479542 MAFBQ9Y5Q3 323 aaPredicted RBP15.14■□□□□ 0.01
ABCF1-206ENST00000479542 IGLV3-22A0A075B6J6 115 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 ZBTB42B2RXF5 422 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 LINC01565O15544 149 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 CCNE2O96020 404 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 PLCB3Q01970 1234 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 ZNF746Q6NUN9 644 aaPredicted RBP15.13■□□□□ 0.01
ABCF1-206ENST00000479542 MIS18BP1Q6P0N0 1132 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 ALYREFQ86V81 257 aaKnown RBP15.13■□□□□ 0.01
ABCF1-206ENST00000479542 SMAP1Q8IYB5 467 aaPredicted RBP15.13■□□□□ 0.01
ABCF1-206ENST00000479542 TRAPPC12Q8WVT3 735 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 UIMC1Q96RL1 719 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 TMEM161AQ9NX61 479 aa15.13■□□□□ 0.01
ABCF1-206ENST00000479542 V9GY48 417 aaPredicted RBP15.13■□□□□ 0.01
ABCF1-206ENST00000479542 TECTAO75443 2155 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 CCDC196A0A1B0GTZ2 297 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 IPO5O00410 1097 aaKnown RBP15.12■□□□□ 0.01
ABCF1-206ENST00000479542 MAGEB2O15479 319 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 ZBTB43O43298 467 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 HMGB1P09429 215 aaKnown RBP15.12■□□□□ 0.01
ABCF1-206ENST00000479542 SETQ01105 290 aaPredicted RBP15.12■□□□□ 0.01
ABCF1-206ENST00000479542 TMEM62Q0P6H9 643 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 NFX1Q12986 1120 aaKnown RBP15.12■□□□□ 0.01
ABCF1-206ENST00000479542 KCNC3Q14003 757 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 KRT32Q14532 448 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 RTN1Q16799 776 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 BMP2KLQ5H9B9 411 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 PDXDC2PQ6P474 469 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 ADGRD2Q7Z7M1 963 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 FBXL16Q8N461 479 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 RSPH1Q8WYR4 309 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 SUSD6Q92537 303 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 ZBTB10Q96DT7 871 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 ADAM2Q99965 735 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 PHF7Q9BWX1 381 aaPredicted RBP15.12■□□□□ 0.01
ABCF1-206ENST00000479542 ZMYND12Q9H0C1 365 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 TLE6Q9H808 572 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 ZNF302Q9NR11 478 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 TLR9Q9NR96 1032 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 FAM217BQ9NTX9 383 aaPredicted RBP15.12■□□□□ 0.01
ABCF1-206ENST00000479542 ST3GAL5Q9UNP4 418 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 CEP131Q9UPN4 1083 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
ABCF1-206ENST00000479542 TRIOO75962 3097 aa15.12■□□□□ 0.01
ABCF1-206ENST00000479542 LOXHD1Q8IVV2 1947 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 FAM86B1E9PN63 330 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 FSCN2O14926 492 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 HOXA2O43364 376 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 MGEA5O60502 916 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 GPR32O75388 356 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 FGF18O76093 207 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 GLP2RO95838 553 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 FAM86B2P0C5J1 330 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 ATP4AP20648 1035 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 CIITAP33076 1130 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 ZNF76P36508 570 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 NRIP1P48552 1158 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 MRE11P49959 708 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 DSC3Q14574 896 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 TRIM67Q6ZTA4 783 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 PLA2G4DQ86XP0 818 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 CCDC60Q8IWA6 550 aaPredicted RBP15.11■□□□□ 0.01
ABCF1-206ENST00000479542 TMEM40Q8WWA1 233 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 LRRC2Q9BYS8 371 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 CDHR5Q9HBB8 845 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 ANO2Q9NQ90 1003 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 MUTYHQ9UIF7 546 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 BRPF3Q9ULD4 1205 aa15.11■□□□□ 0.01
ABCF1-206ENST00000479542 DENND3A2RUS2 1198 aa15.1■□□□□ 0.01
ABCF1-206ENST00000479542 CARNS1A5YM72 827 aa15.1■□□□□ 0.01
ABCF1-206ENST00000479542 BACH1O14867 736 aa15.1■□□□□ 0.01
ABCF1-206ENST00000479542 C22orf31O95567 290 aa15.1■□□□□ 0.01
ABCF1-206ENST00000479542 LAG3P18627 525 aa15.1■□□□□ 0.01
ABCF1-206ENST00000479542 ZXDAP98168 799 aa15.1■□□□□ 0.01
ABCF1-206ENST00000479542 CLUL1Q15846 466 aa15.1■□□□□ 0.01
ABCF1-206ENST00000479542 DUSP6Q16828 381 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms