RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TMCO5BA8MYB1 307 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 LRRN2O75325 713 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 XRCC5P13010 732 aaKnown RBP11.84□□□□□ -0.51
VPS52-217ENST00000478934 PRLRP16471 622 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 EPHA7Q15375 998 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 EDRF1Q3B7T1 1238 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 TBC1D10BQ4KMP7 808 aaPredicted RBP11.84□□□□□ -0.51
VPS52-217ENST00000478934 OTOP1Q7RTM1 612 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 RDH13Q8NBN7 331 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 SLC35C1Q96A29 364 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 KRT12Q99456 494 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 NAP1L4Q99733 375 aaKnown RBP11.84□□□□□ -0.51
VPS52-217ENST00000478934 HSD17B14Q9BPX1 270 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 PDGFDQ9GZP0 370 aaPredicted RBP11.84□□□□□ -0.51
VPS52-217ENST00000478934 SIX2Q9NPC8 291 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■■■■ 142.8
VPS52-217ENST00000478934 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 TISP43B9A030 160 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
VPS52-217ENST00000478934 MCM3P25205 808 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 PAFAH1B1P43034 410 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 GUCY2DQ02846 1103 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 KLHL7Q8IXQ5 586 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 SYN2Q92777 582 aaPredicted RBP11.84□□□□□ -0.51
VPS52-217ENST00000478934 GLT8D2Q9H1C3 349 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 STIM2Q9P246 746 aa11.84□□□□□ -0.51
VPS52-217ENST00000478934 PPIP5K2O43314 1243 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 GFPT2O94808 682 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 NOP2P46087 812 aaKnown RBP11.83□□□□□ -0.52
VPS52-217ENST00000478934 MMP14P50281 582 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 STAT2P52630 851 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 MEI1Q5TIA1 1274 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 LRCH2Q5VUJ6 765 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 IQCEQ6IPM2 695 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 CCDC70Q6NSX1 233 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 FOXR2Q6PJQ5 311 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 MOXD1Q6UVY6 613 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 ZNF572Q7Z3I7 529 aaPredicted RBP11.83□□□□□ -0.52
VPS52-217ENST00000478934 MSL3Q8N5Y2 521 aaKnown RBP11.83□□□□□ -0.52
VPS52-217ENST00000478934 FAM20AQ96MK3 541 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 EPB41L5Q9HCM4 733 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 GCNT4Q9P109 453 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 ZMYM2Q9UBW7 1377 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 PDXKO00764 312 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 CIITAP33076 1130 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 CYP2J2P51589 502 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 TTMPQ5BVD1 217 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 FRMD5Q7Z6J6 570 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 RNF10Q8N5U6 811 aaKnown RBP11.83□□□□□ -0.52
VPS52-217ENST00000478934 FAM76AQ8TAV0 307 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 BBXQ8WY36 941 aaPredicted RBP11.83□□□□□ -0.52
VPS52-217ENST00000478934 TMEM39BQ9GZU3 492 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 VEZTQ9HBM0 779 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 C10orf71Q711Q0 1435 aa11.83□□□□□ -0.52
VPS52-217ENST00000478934 KCNK3O14649 394 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 TBX3O15119 743 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 HEXIM1O94992 359 aaKnown RBP11.82□□□□□ -0.52
VPS52-217ENST00000478934 EYA4O95677 639 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 FOSP01100 380 aaPredicted RBP11.82□□□□□ -0.52
VPS52-217ENST00000478934 CFAP221Q4G0U5 840 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 C1orf186Q6ZWK4 172 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 C7orf43Q8WVR3 580 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 MRIQ9BWK5 157 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 AP1M1Q9BXS5 423 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 NAGPAQ9UK23 515 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 PCNTO95613 3336 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 TMEM150BA6NC51 233 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 CALUO43852 315 aaPredicted RBP11.82□□□□□ -0.52
VPS52-217ENST00000478934 PSMD10O75832 226 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 FAM13AO94988 1023 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 CCT5P48643 541 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 CBWD6Q4V339 395 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 CBWD3Q5JTY5 395 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 CBWD5Q5RIA9 395 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 ALKBH5Q6P6C2 394 aaKnown RBP11.82□□□□□ -0.52
VPS52-217ENST00000478934 BTNL9Q6UXG8 535 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 ZSWIM2Q8NEG5 633 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 ZIM3Q96PE6 472 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 UNC45AQ9H3U1 944 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 TYW1Q9NV66 732 aaKnown RBP11.82□□□□□ -0.52
VPS52-217ENST00000478934 PCDHGC5Q9Y5F6 944 aa11.82□□□□□ -0.52
VPS52-217ENST00000478934 DDX3XO00571 662 aaKnown RBP eCLIP11.81□□□□□ -0.529e-9■□□□□ 9.1
VPS52-217ENST00000478934 HDLBPQ00341 1268 aaKnown RBP11.81□□□□□ -0.52
VPS52-217ENST00000478934 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 PPP4R3CPQ6ZMV5 832 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPS52-217ENST00000478934 U2AF1L4Q8WU68 220 aaKnown RBP11.81□□□□□ -0.52
VPS52-217ENST00000478934 CASKIN2Q8WXE0 1202 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 AGBL1Q96MI9 1066 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 CCDC43Q96MW1 224 aaKnown RBP11.81□□□□□ -0.52
VPS52-217ENST00000478934 INPP4AQ96PE3 977 aaPredicted RBP11.81□□□□□ -0.52
VPS52-217ENST00000478934 FIZ1Q96SL8 496 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 POLR3CQ9BUI4 534 aaPredicted RBP11.81□□□□□ -0.52
VPS52-217ENST00000478934 NUCKS1Q9H1E3 243 aaKnown RBP11.81□□□□□ -0.52
VPS52-217ENST00000478934 RASSF4Q9H2L5 321 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 SAMM50Q9Y512 469 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 IVLP07476 585 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms