RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CD207Q9UJ71 328 aa15.06■□□□□ 0
VCL-205ENST00000478896 PCDHB7Q9Y5E2 793 aa15.06■□□□□ 0
VCL-205ENST00000478896 COL1A2P08123 1366 aa15.06■□□□□ 0
VCL-205ENST00000478896 IGKV6D-21A0A0A0MT36 114 aa15.05■□□□□ -0
VCL-205ENST00000478896 CCDC196A0A1B0GTZ2 297 aa15.05■□□□□ -0
VCL-205ENST00000478896 FAM86B1E9PN63 330 aa15.05■□□□□ -0
VCL-205ENST00000478896 LINC01565O15544 149 aa15.05■□□□□ -0
VCL-205ENST00000478896 CDC45O75419 566 aa15.05■□□□□ -0
VCL-205ENST00000478896 CCNE2O96020 404 aa15.05■□□□□ -0
VCL-205ENST00000478896 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
VCL-205ENST00000478896 FAM86B2P0C5J1 330 aa15.05■□□□□ -0
VCL-205ENST00000478896 SARSP49591 514 aaKnown RBP15.05■□□□□ -0
VCL-205ENST00000478896 GATMP50440 423 aa15.05■□□□□ -0
VCL-205ENST00000478896 RCAN1P53805 252 aa15.05■□□□□ -0
VCL-205ENST00000478896 SETQ01105 290 aaPredicted RBP15.05■□□□□ -0
VCL-205ENST00000478896 SMAD4Q13485 552 aaKnown RBP15.05■□□□□ -0
VCL-205ENST00000478896 SMAD2Q15796 467 aaKnown RBP15.05■□□□□ -0
VCL-205ENST00000478896 PFKFB3Q16875 520 aaPredicted RBP15.05■□□□□ -0
VCL-205ENST00000478896 ABHD15Q6UXT9 468 aa15.05■□□□□ -0
VCL-205ENST00000478896 RASEFQ8IZ41 740 aa15.05■□□□□ -0
VCL-205ENST00000478896 CCDC12Q8WUD4 166 aaPredicted RBP15.05■□□□□ -0
VCL-205ENST00000478896 ZNF577Q9BSK1 485 aa15.05■□□□□ -0
VCL-205ENST00000478896 UPF3BQ9BZI7 483 aaKnown RBP15.05■□□□□ -0
VCL-205ENST00000478896 TMX1Q9H3N1 280 aa15.05■□□□□ -0
VCL-205ENST00000478896 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
VCL-205ENST00000478896 FNDC1Q4ZHG4 1894 aaPredicted RBP15.05■□□□□ -0
VCL-205ENST00000478896 IPO5O00410 1097 aaKnown RBP15.04■□□□□ -0
VCL-205ENST00000478896 PPFIA3O75145 1194 aa15.04■□□□□ -0
VCL-205ENST00000478896 IRS1P35568 1242 aa15.04■□□□□ -0
VCL-205ENST00000478896 TSGA10IPQ3SY00 556 aa15.04■□□□□ -0
VCL-205ENST00000478896 ZNF484Q5JVG2 852 aa15.04■□□□□ -0
VCL-205ENST00000478896 SWSAP1Q6NVH7 229 aa15.04■□□□□ -0
VCL-205ENST00000478896 CENPQQ7L2Z9 268 aaPredicted RBP15.04■□□□□ -0
VCL-205ENST00000478896 ADGRD2Q7Z7M1 963 aa15.04■□□□□ -0
VCL-205ENST00000478896 METTL13Q8N6R0 699 aa15.04■□□□□ -0
VCL-205ENST00000478896 SPPL3Q8TCT6 385 aa15.04■□□□□ -0
VCL-205ENST00000478896 C6orf50Q9HD87 102 aa15.04■□□□□ -0
VCL-205ENST00000478896 ERVK-5Q9HDB9 667 aa15.04■□□□□ -0
VCL-205ENST00000478896 AAASQ9NRG9 546 aa15.04■□□□□ -0
VCL-205ENST00000478896 C1orf112Q9NSG2 853 aa15.04■□□□□ -0
VCL-205ENST00000478896 FAM217BQ9NTX9 383 aaPredicted RBP15.04■□□□□ -0
VCL-205ENST00000478896 NOC2LQ9Y3T9 749 aaKnown RBP15.04■□□□□ -0
VCL-205ENST00000478896 SAMM50Q9Y512 469 aa15.04■□□□□ -0
VCL-205ENST00000478896 PCDHB12Q9Y5F1 795 aa15.04■□□□□ -0
VCL-205ENST00000478896 C19orf67A6NJJ6 358 aa15.03■□□□□ -0
VCL-205ENST00000478896 TBKBP1A7MCY6 615 aa15.03■□□□□ -0
VCL-205ENST00000478896 GPR182O15218 404 aa15.03■□□□□ -0
VCL-205ENST00000478896 MGEA5O60502 916 aa15.03■□□□□ -0
VCL-205ENST00000478896 DNAJB1P25685 340 aa15.03■□□□□ -0
VCL-205ENST00000478896 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
VCL-205ENST00000478896 ADD1P35611 737 aaKnown RBP15.03■□□□□ -0
VCL-205ENST00000478896 AKAP17AQ02040 695 aaKnown RBP15.03■□□□□ -0
VCL-205ENST00000478896 APOBRQ0VD83 1088 aa15.03■□□□□ -0
VCL-205ENST00000478896 CAMK1Q14012 370 aa15.03■□□□□ -0
VCL-205ENST00000478896 RBM23Q86U06 439 aaKnown RBP15.03■□□□□ -0
VCL-205ENST00000478896 REXO1Q8N1G1 1221 aaKnown RBP15.03■□□□□ -0
VCL-205ENST00000478896 CRIPAKQ8N1N5 446 aa15.03■□□□□ -0
VCL-205ENST00000478896 MICAL1Q8TDZ2 1067 aa15.03■□□□□ -0
VCL-205ENST00000478896 TMEM40Q8WWA1 233 aa15.03■□□□□ -0
VCL-205ENST00000478896 BBXQ8WY36 941 aaPredicted RBP15.03■□□□□ -0
VCL-205ENST00000478896 OSMRQ99650 979 aa15.03■□□□□ -0
VCL-205ENST00000478896 ADAM2Q99965 735 aa15.03■□□□□ -0
VCL-205ENST00000478896 TBC1D22BQ9NU19 505 aa15.03■□□□□ -0
VCL-205ENST00000478896 CEP131Q9UPN4 1083 aa15.03■□□□□ -0
VCL-205ENST00000478896 IGLV3-22A0A075B6J6 115 aa15.02■□□□□ -0
VCL-205ENST00000478896 ESYT2A0FGR8 921 aa15.02■□□□□ -0
VCL-205ENST00000478896 PSAPP07602 524 aa15.02■□□□□ -0
VCL-205ENST00000478896 CYP3A4P08684 503 aa15.02■□□□□ -0
VCL-205ENST00000478896 CPA1P15085 419 aa15.02■□□□□ -0
VCL-205ENST00000478896 GNA11P29992 359 aa15.02■□□□□ -0
VCL-205ENST00000478896 NRIP1P48552 1158 aa15.02■□□□□ -0
VCL-205ENST00000478896 ADAM15Q13444 863 aa15.02■□□□□ -0
VCL-205ENST00000478896 KIZQ2M2Z5 673 aa15.02■□□□□ -0
VCL-205ENST00000478896 PRR16Q569H4 304 aa15.02■□□□□ -0
VCL-205ENST00000478896 MCTP2Q6DN12 878 aa15.02■□□□□ -0
VCL-205ENST00000478896 ZNF746Q6NUN9 644 aaPredicted RBP15.02■□□□□ -0
VCL-205ENST00000478896 Q6ZUG5 572 aa15.02■□□□□ -0
VCL-205ENST00000478896 SLC24A5Q71RS6 500 aa15.02■□□□□ -0
VCL-205ENST00000478896 SMAP1Q8IYB5 467 aaPredicted RBP15.02■□□□□ -0
VCL-205ENST00000478896 THNSL1Q8IYQ7 743 aa15.02■□□□□ -0
VCL-205ENST00000478896 KIAA0319LQ8IZA0 1049 aa15.02■□□□□ -0
VCL-205ENST00000478896 BRF1Q92994 677 aa15.02■□□□□ -0
VCL-205ENST00000478896 ZMYND12Q9H0C1 365 aa15.02■□□□□ -0
VCL-205ENST00000478896 CDHR5Q9HBB8 845 aa15.02■□□□□ -0
VCL-205ENST00000478896 RGS18Q9NS28 235 aa15.02■□□□□ -0
VCL-205ENST00000478896 ST3GAL5Q9UNP4 418 aa15.02■□□□□ -0
VCL-205ENST00000478896 BDP1A6H8Y1 2624 aa15.02□□□□□ -0.01
VCL-205ENST00000478896 WDR81Q562E7 1941 aa15.02□□□□□ -0.01
VCL-205ENST00000478896 DHX15O43143 795 aaKnown RBP15.01□□□□□ -0.01
VCL-205ENST00000478896 C22orf31O95567 290 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 VTNP04004 478 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 CRYBB1P53674 252 aaPredicted RBP15.01□□□□□ -0.01
VCL-205ENST00000478896 BLOC1S2Q6QNY1 142 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 FAM43BQ6ZT52 329 aaPredicted RBP15.01□□□□□ -0.01
VCL-205ENST00000478896 FAM228AQ86W67 206 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 EFHBQ8N7U6 833 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 CCDC148Q8NFR7 591 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 JAKMIP1Q96N16 626 aaKnown RBP15.01□□□□□ -0.01
VCL-205ENST00000478896 MAP7D2Q96T17 732 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 TLR9Q9NR96 1032 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms