RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 PCDHA10Q9Y5I2 948 aa25.86■■□□□ 1.73
C9orf3-216ENST00000478603 KIAA1671Q9BY89 1806 aa25.86■■□□□ 1.73
C9orf3-216ENST00000478603 CPLX1O14810 134 aa25.85■■□□□ 1.73
C9orf3-216ENST00000478603 PSAPP07602 524 aa25.85■■□□□ 1.73
C9orf3-216ENST00000478603 BTG3Q14201 252 aaPredicted RBP25.85■■□□□ 1.73
C9orf3-216ENST00000478603 SMAP1Q8IYB5 467 aaPredicted RBP25.85■■□□□ 1.73
C9orf3-216ENST00000478603 ZNF689Q96CS4 500 aaPredicted RBP25.85■■□□□ 1.73
C9orf3-216ENST00000478603 AIFM3Q96NN9 605 aa25.85■■□□□ 1.73
C9orf3-216ENST00000478603 FTHL17Q9BXU8 183 aa25.85■■□□□ 1.73
C9orf3-216ENST00000478603 TMX1Q9H3N1 280 aa25.85■■□□□ 1.73
C9orf3-216ENST00000478603 PDRG1Q9NUG6 133 aa25.85■■□□□ 1.73
C9orf3-216ENST00000478603 SAMM50Q9Y512 469 aa25.85■■□□□ 1.73
C9orf3-216ENST00000478603 MSH4O15457 936 aa25.84■■□□□ 1.73
C9orf3-216ENST00000478603 DGKIO75912 1065 aa25.84■■□□□ 1.73
C9orf3-216ENST00000478603 C22orf31O95567 290 aa25.84■■□□□ 1.73
C9orf3-216ENST00000478603 NFX1Q12986 1120 aaKnown RBP25.84■■□□□ 1.73
C9orf3-216ENST00000478603 TMEM40Q8WWA1 233 aa25.84■■□□□ 1.73
C9orf3-216ENST00000478603 BBXQ8WY36 941 aaPredicted RBP25.84■■□□□ 1.73
C9orf3-216ENST00000478603 GJA10Q969M2 543 aa25.84■■□□□ 1.73
C9orf3-216ENST00000478603 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.83■■□□□ 1.73
C9orf3-216ENST00000478603 IBSPP21815 317 aaPredicted RBP25.83■■□□□ 1.73
C9orf3-216ENST00000478603 BMPR1AP36894 532 aa25.83■■□□□ 1.73
C9orf3-216ENST00000478603 CRIPAKQ8N1N5 446 aa25.83■■□□□ 1.73
C9orf3-216ENST00000478603 BANK1Q8NDB2 785 aa25.83■■□□□ 1.73
C9orf3-216ENST00000478603 TBCKQ8TEA7 893 aa25.83■■□□□ 1.73
C9orf3-216ENST00000478603 PCDHA4Q9UN74 947 aa25.83■■□□□ 1.73
C9orf3-216ENST00000478603 NOC2LQ9Y3T9 749 aaKnown RBP25.83■■□□□ 1.73
C9orf3-216ENST00000478603 C5orf67F2Z3F1 127 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 DEXIO95424 95 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 KCNA5P22460 613 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 USP11P51784 963 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 TIGD5Q53EQ6 642 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 TCEAL5Q5H9L2 206 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 NPAS4Q8IUM7 802 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 METTL13Q8N6R0 699 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 CLP1Q92989 425 aaKnown RBP25.82■■□□□ 1.72
C9orf3-216ENST00000478603 ERVK-5Q9HDB9 667 aa25.82■■□□□ 1.72
C9orf3-216ENST00000478603 BDP1A6H8Y1 2624 aa25.81■■□□□ 1.72
C9orf3-216ENST00000478603 WDR64B1ANS9 1081 aa25.81■■□□□ 1.72
C9orf3-216ENST00000478603 CHMP2AO43633 222 aa25.81■■□□□ 1.72
C9orf3-216ENST00000478603 MGEA5O60502 916 aa25.81■■□□□ 1.72
C9orf3-216ENST00000478603 VTNP04004 478 aa25.81■■□□□ 1.72
C9orf3-216ENST00000478603 KIZQ2M2Z5 673 aa25.81■■□□□ 1.72
C9orf3-216ENST00000478603 PAN2Q504Q3 1202 aaKnown RBP25.81■■□□□ 1.72
C9orf3-216ENST00000478603 SLC5A5Q92911 643 aa25.81■■□□□ 1.72
C9orf3-216ENST00000478603 DISC1Q9NRI5 854 aa25.81■■□□□ 1.72
C9orf3-216ENST00000478603 MRPL42Q9Y6G3 142 aaKnown RBP25.81■■□□□ 1.72
C9orf3-216ENST00000478603 GRM6O15303 877 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 ZNF862O60290 1169 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 GAS7O60861 476 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 DTNBO60941 627 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 RPS6KA5O75582 802 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 CSPG5O95196 566 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 TDP2O95551 362 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 RB1P06400 928 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 GATMP50440 423 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 CLCN3P51790 818 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 NPY5RQ15761 445 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 LRCH2Q5VUJ6 765 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 BLIDQ8IZY5 108 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 OSMRQ99650 979 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 C11orf84Q9BUA3 381 aaPredicted RBP25.8■■□□□ 1.72
C9orf3-216ENST00000478603 UNC45AQ9H3U1 944 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 RWDD3Q9Y3V2 267 aa25.8■■□□□ 1.72
C9orf3-216ENST00000478603 M0R2N6 131 aa25.79■■□□□ 1.72
C9orf3-216ENST00000478603 STAG3L1P0CL83 205 aa25.79■■□□□ 1.72
C9orf3-216ENST00000478603 UGCGQ16739 394 aa25.79■■□□□ 1.72
C9orf3-216ENST00000478603 CPLX2Q6PUV4 134 aaKnown RBP25.79■■□□□ 1.72
C9orf3-216ENST00000478603 RIT2Q99578 217 aa25.79■■□□□ 1.72
C9orf3-216ENST00000478603 TEKT3Q9BXF9 490 aa25.79■■□□□ 1.72
C9orf3-216ENST00000478603 NSUN3Q9H649 340 aaKnown RBP25.79■■□□□ 1.72
C9orf3-216ENST00000478603 ST3GAL5Q9UNP4 418 aa25.79■■□□□ 1.72
C9orf3-216ENST00000478603 OATP04181 439 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 PRKCEQ02156 737 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 SCRN1Q12765 414 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 LEXMQ3ZCV2 418 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 CMTR2Q8IYT2 770 aaKnown RBP25.78■■□□□ 1.72
C9orf3-216ENST00000478603 DAGLBQ8NCG7 672 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.78■■□□□ 1.72
C9orf3-216ENST00000478603 FAM167AQ96KS9 214 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 C22orf23Q9BZE7 217 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 LRFN2Q9ULH4 789 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 KCNJ14Q9UNX9 436 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 CEP131Q9UPN4 1083 aa25.78■■□□□ 1.72
C9orf3-216ENST00000478603 FNDC1Q4ZHG4 1894 aaPredicted RBP25.78■■□□□ 1.72
C9orf3-216ENST00000478603 GPR32O75388 356 aa25.77■■□□□ 1.72
C9orf3-216ENST00000478603 CRYBB1P53674 252 aaPredicted RBP25.77■■□□□ 1.72
C9orf3-216ENST00000478603 Q4G0T1 1027 aa25.77■■□□□ 1.72
C9orf3-216ENST00000478603 EFCAB12Q6NXP0 572 aa25.77■■□□□ 1.72
C9orf3-216ENST00000478603 EP400NLQ6ZTU2 488 aa25.77■■□□□ 1.72
C9orf3-216ENST00000478603 FAM228AQ86W67 206 aa25.77■■□□□ 1.72
C9orf3-216ENST00000478603 LRRC71Q8N4P6 559 aa25.77■■□□□ 1.72
C9orf3-216ENST00000478603 ADAM2Q99965 735 aa25.77■■□□□ 1.72
C9orf3-216ENST00000478603 ALG13Q9NP73 1137 aaKnown RBP25.77■■□□□ 1.72
C9orf3-216ENST00000478603 PPP4R2Q9NY27 417 aa25.77■■□□□ 1.72
C9orf3-216ENST00000478603 DENND3A2RUS2 1198 aa25.76■■□□□ 1.71
C9orf3-216ENST00000478603 H3BQ06 376 aaPredicted RBP25.76■■□□□ 1.71
C9orf3-216ENST00000478603 PSMD10O75832 226 aa25.76■■□□□ 1.71
C9orf3-216ENST00000478603 SARSP49591 514 aaKnown RBP25.76■■□□□ 1.71
C9orf3-216ENST00000478603 NRBP2Q9NSY0 501 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms