RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 EYSQ5T1H1 3165 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 MBLAC1A4D2B0 266 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 RSPH10B2B2RC85 870 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 IQCF3P0C7M6 154 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 RSPH10BP0C881 870 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 KLRC1P26715 233 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 CEBPZQ03701 1054 aaKnown RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 EPHA7Q15375 998 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 FOXD4L6Q3SYB3 417 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 TAF2Q6P1X5 1199 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 FOXD4L3Q6VB84 417 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 RSPH3Q86UC2 560 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 LRRC71Q8N4P6 559 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 C4orf32Q8N8J7 132 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 RNPC3Q96LT9 517 aaKnown RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 CCDC43Q96MW1 224 aaKnown RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 IL23AQ9NPF7 189 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 NRBP2Q9NSY0 501 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 BMP2KQ9NSY1 1161 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 CEP131Q9UPN4 1083 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 GINS2Q9Y248 185 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 PTPRSQ13332 1948 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 VWA3AA6NCI4 1184 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 ZBBXA8MT70 800 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 LAD1O00515 517 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 C22orf31O95567 290 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 YWHABP31946 246 aaKnown RBP7.72□□□□□ -1.17
BRCA1-215ENST00000478531 BMP8BP34820 402 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 CLCN3P51790 818 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 ATP2C1P98194 919 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-215ENST00000478531 TBC1D8BQ0IIM8 1120 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 PKP1Q13835 747 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 MBTPS1Q14703 1052 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 SF3A1Q15459 793 aaKnown RBP7.72□□□□□ -1.17
BRCA1-215ENST00000478531 SHHQ15465 462 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 XKR3Q5GH77 459 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 PSRC1Q6PGN9 363 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-215ENST00000478531 DTHD1Q6ZMT9 781 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 ZNF365Q70YC5 407 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 ANO5Q75V66 913 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 OTOP2Q7RTS6 562 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 ERMNQ8TAM6 284 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 RAB34Q9BZG1 259 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 PRO3102Q9H379 93 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 ZSWIM4Q9H7M6 989 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 SUGCTQ9HAC7 445 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 LRWD1Q9UFC0 647 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 AKT3Q9Y243 479 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 PCDHA2Q9Y5H9 948 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 TCHHQ07283 1943 aa7.72□□□□□ -1.17
BRCA1-215ENST00000478531 A0A087WWV3 80 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 PP2D1A8MPX8 630 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 M0QZ92 97 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 ZBTB39O15060 712 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 DKC1O60832 514 aaKnown RBP eCLIP7.71□□□□□ -1.17
BRCA1-215ENST00000478531 NBNO60934 754 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 MED24O75448 989 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 SLITRK3O94933 977 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 VTNP04004 478 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 RFC2P35250 354 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 FXR2P51116 673 aaKnown RBP eCLIP7.71□□□□□ -1.17
BRCA1-215ENST00000478531 NPEPPSP55786 919 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 MRPS6P82932 125 aaKnown RBP7.71□□□□□ -1.17
BRCA1-215ENST00000478531 RBL2Q08999 1139 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 ZRSR1Q15695 479 aaKnown RBP7.71□□□□□ -1.17
BRCA1-215ENST00000478531 TMEM240Q5SV17 173 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 HAUS3Q68CZ6 603 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 EFCAB12Q6NXP0 572 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 POTEGQ6S5H5 508 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 C16orf59Q7L2K0 433 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 RPUSD2Q8IZ73 545 aaKnown RBP7.71□□□□□ -1.17
BRCA1-215ENST00000478531 NEK9Q8TD19 979 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 PIGOQ8TEQ8 1089 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 CEP170P1Q96L14 293 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 CLIC4Q9Y696 253 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 CDY2AQ9Y6F7 541 aa7.71□□□□□ -1.17
BRCA1-215ENST00000478531 MYH11P35749 1972 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 SMIM35A0A1B0GVV1 85 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 CAND2O75155 1236 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 STBD1O95210 358 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 CHRNA1P02708 482 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 ZSCAN22P10073 491 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-215ENST00000478531 GHRP10912 638 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 CDC25AP30304 524 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 CCT6AP40227 531 aaKnown RBP7.71□□□□□ -1.18
BRCA1-215ENST00000478531 PRPHP41219 470 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 POLGP54098 1239 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-215ENST00000478531 IL17AQ16552 155 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 XKR9Q5GH70 373 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 HABP4Q5JVS0 413 aaKnown RBP7.71□□□□□ -1.18
BRCA1-215ENST00000478531 TRAF7Q6Q0C0 670 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 CATSPER3Q86XQ3 398 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 C4orf19Q8IY42 314 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 IGSF22Q8N9C0 903 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 ZNF579Q8NAF0 562 aaKnown RBP7.71□□□□□ -1.18
BRCA1-215ENST00000478531 SNX29Q8TEQ0 813 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 ZNF668Q96K58 619 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-215ENST00000478531 SCLT1Q96NL6 688 aa7.71□□□□□ -1.18
BRCA1-215ENST00000478531 MAP7D2Q96T17 732 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms