RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 A0A0G2JNJ9 132 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 ZNF561-AS1K7EIQ3 104 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 AQP7O14520 342 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 MAKP20794 623 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 MEOX1P50221 254 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 HERVK_113P62684 666 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 GRM7Q14831 915 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 SEC23AQ15436 765 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 MAMDC2Q7Z304 686 aaPredicted RBP5.33□□□□□ -1.56
HPS3-205ENST00000478525 SGMS1Q86VZ5 419 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 RTKN2Q8IZC4 609 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 D2HGDHQ8N465 521 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 TMEM176AQ96HP8 235 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 AGAP2Q99490 1192 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 NELFAQ9H3P2 528 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 AGO3Q9H9G7 860 aaKnown RBP5.33□□□□□ -1.56
HPS3-205ENST00000478525 SMURF1Q9HCE7 757 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 Q9UFV3 132 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 GIT1Q9Y2X7 761 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 PCDHA8Q9Y5H6 950 aa5.33□□□□□ -1.56
HPS3-205ENST00000478525 CAPN14A8MX76 684 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 ARVCFO00192 962 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 SLC26A4O43511 780 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 MMEP08473 750 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 C6orf222P0C671 652 aaPredicted RBP5.32□□□□□ -1.56
HPS3-205ENST00000478525 ECE1P42892 770 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 STAT5BP51692 787 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 HHEXQ03014 270 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 SPTY2D1Q68D10 685 aaPredicted RBP5.32□□□□□ -1.56
HPS3-205ENST00000478525 ADGRE4PQ86SQ3 457 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 DNAJC10Q8IXB1 793 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 SHCBP1Q8NEM2 672 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 CLIP3Q96DZ5 547 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 OR10A5Q9H207 317 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 UCKL1Q9NWZ5 548 aa5.32□□□□□ -1.56
HPS3-205ENST00000478525 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 ADCY3O60266 1144 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 CLASP2O75122 1294 aaKnown RBP5.31□□□□□ -1.56
HPS3-205ENST00000478525 SRGAP2CP0DJJ0 459 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 GUCY1A3Q02108 690 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 MOGSQ13724 837 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 TM4SF20Q53R12 229 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 EP400NLQ6ZTU2 488 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 SPATC1Q76KD6 591 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 C16orf59Q7L2K0 433 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 MRGPRGQ86SM5 289 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 TMPRSS6Q8IU80 811 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 PTPRN2Q92932 1015 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 SPATA9Q9BWV2 254 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 SLC2A4RGQ9NR83 387 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 FAM184BQ9ULE4 1060 aa5.31□□□□□ -1.56
HPS3-205ENST00000478525 REXO2Q9Y3B8 237 aaKnown RBP5.31□□□□□ -1.56
HPS3-205ENST00000478525 CCDC66A2RUB6 948 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 TCF3P15923 654 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 KRT4P19013 534 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 ST5P78524 1137 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 RIN1Q13671 783 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 RAB33AQ14088 237 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 RRP1BQ14684 758 aaKnown RBP5.3□□□□□ -1.56
HPS3-205ENST00000478525 CRY1Q16526 586 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 GRAMD4Q6IC98 578 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 FSTL4Q6MZW2 842 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 Q6ZPA2 131 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 ZNF669Q96BR6 464 aaPredicted RBP5.3□□□□□ -1.56
HPS3-205ENST00000478525 PARPBPQ9NWS1 579 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 DMRT1Q9Y5R6 373 aa5.3□□□□□ -1.56
HPS3-205ENST00000478525 CYP27B1O15528 508 aa5.29□□□□□ -1.56
HPS3-205ENST00000478525 SUMO1P63165 101 aaKnown RBP5.29□□□□□ -1.56
HPS3-205ENST00000478525 CRHR2Q13324 411 aa5.29□□□□□ -1.56
HPS3-205ENST00000478525 SAFB2Q14151 953 aaKnown RBP eCLIP5.29□□□□□ -1.56
HPS3-205ENST00000478525 FOXB2Q5VYV0 432 aa5.29□□□□□ -1.56
HPS3-205ENST00000478525 NOSTRINQ8IVI9 506 aa5.29□□□□□ -1.56
HPS3-205ENST00000478525 WDR48Q8TAF3 677 aa5.29□□□□□ -1.56
HPS3-205ENST00000478525 ASB15Q8WXK1 588 aa5.29□□□□□ -1.56
HPS3-205ENST00000478525 ZG16BQ96DA0 208 aa5.29□□□□□ -1.56
HPS3-205ENST00000478525 PCDHA9Q9Y5H5 950 aa5.29□□□□□ -1.56
HPS3-205ENST00000478525 TRBV23-1A0A0A0MS06 115 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 PMS2P1A4D2B8 440 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 RASSF10A6NK89 507 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 STAT3P40763 770 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 DNM2P50570 870 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 FAM47CQ5HY64 1035 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 FAM209AQ5JX71 171 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 SCUBE1Q8IWY4 988 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 BCL6BQ8N143 479 aaPredicted RBP5.28□□□□□ -1.56
HPS3-205ENST00000478525 THEMISQ8N1K5 641 aaPredicted RBP5.28□□□□□ -1.56
HPS3-205ENST00000478525 CISD2Q8N5K1 135 aaKnown RBP5.28□□□□□ -1.56
HPS3-205ENST00000478525 CRAMP1Q96RY5 1269 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 GMLQ99445 158 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 CDC6Q99741 560 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 SH3BP1Q9Y3L3 701 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 PCSK5Q92824 1860 aa5.28□□□□□ -1.56
HPS3-205ENST00000478525 PRAMEF22A3QJZ6 481 aa5.27□□□□□ -1.57
HPS3-205ENST00000478525 SCDO00767 359 aa5.27□□□□□ -1.57
HPS3-205ENST00000478525 LACTBP83111 547 aaPredicted RBP5.27□□□□□ -1.57
HPS3-205ENST00000478525 SLC25A3Q00325 362 aa5.27□□□□□ -1.57
HPS3-205ENST00000478525 Q6ZRM9 215 aa5.27□□□□□ -1.57
HPS3-205ENST00000478525 ZC3H7AQ8IWR0 971 aaKnown RBP5.27□□□□□ -1.57
HPS3-205ENST00000478525 PRRX2Q99811 253 aa5.27□□□□□ -1.57
HPS3-205ENST00000478525 MSRB2Q9Y3D2 182 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms