RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 L2HGDHQ9H9P8 463 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 KCND1Q9NSA2 647 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 ATP8A1Q9Y2Q0 1164 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 A0A1B0GTL3 188 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 DDX3XO00571 662 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 RAB11FIP3O75154 756 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 ULK1O75385 1050 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 ZNF28P17035 718 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 ID4P47928 161 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 PHC1P78364 1004 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 ALDH6A1Q02252 535 aaKnown RBP5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 ROM1Q03395 351 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 LRRC32Q14392 662 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 DDB1Q16531 1140 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 TTC38Q5R3I4 469 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 GPR158Q5T848 1215 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 LRSAM1Q6UWE0 723 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 CARFQ8N187 725 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 C7orf31Q8N865 590 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 ZNF610Q8N9Z0 462 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 WDR66Q8TBY9 1149 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 SLC5A5Q92911 643 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 MAML3Q96JK9 1138 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 FAM126AQ9BYI3 521 aaPredicted RBP5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 ZMAT4Q9H898 229 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 PCDH12Q9NPG4 1184 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 FTSJ1Q9UET6 329 aa5.47□□□□□ -1.53
SMARCA1-204ENST00000478420 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 H0Y858 1186 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 KNG1P01042 644 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 PRLP01236 227 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 CYP1A1P04798 512 aaPredicted RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 POU3F3P20264 500 aaPredicted RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 IL13RA1P78552 427 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 TMPRSS15P98073 1019 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 AMPD3Q01432 767 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 SLC6A3Q01959 620 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 TERF2Q15554 542 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 WDR72Q3MJ13 1102 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 BROXQ5VW32 411 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 RNF219Q5W0B1 726 aaPredicted RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 TIGD7Q6NT04 549 aaPredicted RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 CXXC5Q7LFL8 322 aaKnown RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 HDGFL2Q7Z4V5 671 aaPredicted RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 DDX42Q86XP3 938 aaKnown RBP eCLIP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 C1QL4Q86Z23 238 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 PHYKPLQ8IUZ5 450 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 TP53I13Q8NBR0 393 aaPredicted RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 ZCCHC14Q8WYQ9 949 aaKnown RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 RTF1Q92541 710 aaKnown RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 TUBGCP5Q96RT8 1024 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 KRTAP4-2Q9BYR5 136 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 BRINP2Q9C0B6 783 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 OR10A5Q9H207 317 aa5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 USP36Q9P275 1121 aaKnown RBP5.46□□□□□ -1.54
SMARCA1-204ENST00000478420 GPR39O43194 453 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 ZSCAN22P10073 491 aaPredicted RBP5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 APEX1P27695 318 aaKnown RBP5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 SESN3P58005 492 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 STILQ15468 1287 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 PRAMEF9Q5VWM5 478 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 MCTP2Q6DN12 878 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 IQSEC1Q6DN90 963 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 SLFN12LQ6IEE8 588 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 SPATS2Q86XZ4 545 aaKnown RBP5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 SPATA25Q9BR10 227 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 TMEM168Q9H0V1 697 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 MSRAQ9UJ68 235 aa5.45□□□□□ -1.54
SMARCA1-204ENST00000478420 APOL3O95236 402 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 COL6A1P12109 1028 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 RGS3P49796 1198 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 SLURP1P55000 103 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 MAP3K12Q12852 859 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 FAM26FQ5R3K3 315 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 KANK2Q63ZY3 851 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 FRMD7Q6ZUT3 714 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 LHFPL2Q6ZUX7 228 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 RASSF3Q86WH2 238 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 SP8Q8IXZ3 490 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 ADAMTS17Q8TE56 1095 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 YTHDC1Q96MU7 727 aaKnown RBP5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 POFUT1Q9H488 388 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 KCNG1Q9UIX4 513 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 FBXO10Q9UK96 956 aa5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 NOP58Q9Y2X3 529 aaKnown RBP5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 NOC2LQ9Y3T9 749 aaKnown RBP5.44□□□□□ -1.54
SMARCA1-204ENST00000478420 KDM1AO60341 852 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 KLHL18O94889 574 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 PRPF6O94906 941 aaKnown RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 CDK11BP21127 795 aaKnown RBP5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 KCNC1P48547 511 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 CD83Q01151 205 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 ADCY2Q08462 1091 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 FAPQ12884 760 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 FZD5Q13467 585 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 RGL3Q3MIN7 710 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 ESPNLQ6ZVH7 1005 aa5.43□□□□□ -1.54
SMARCA1-204ENST00000478420 OTOP2Q7RTS6 562 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms