RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TMEM150BA6NC51 233 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 EVI5O60447 810 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 TNFAIP3P21580 790 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 CORO7P57737 925 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 TUBB2AQ13885 445 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 SYCP2LQ5T4T6 812 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 DPH6Q7L8W6 267 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 CCDC105Q8IYK2 499 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 TUBB2BQ9BVA1 445 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 DDX4Q9NQI0 724 aaKnown RBP10.63□□□□□ -0.71
CMC1-209ENST00000477739 HAUS2Q9NVX0 235 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 NOC2LQ9Y3T9 749 aaKnown RBP10.63□□□□□ -0.71
CMC1-209ENST00000477739 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 LRRC10BA6NIK2 292 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 MED24O75448 989 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 H2AFZP0C0S5 128 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 NEFHP12036 1026 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 EEF2P13639 858 aaKnown RBP10.63□□□□□ -0.71
CMC1-209ENST00000477739 DDR1Q08345 913 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 KCNMA1Q12791 1236 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 WDR93Q6P2C0 686 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 SEPT14Q6ZU15 432 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 H2AFVQ71UI9 128 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 TBC1D1Q86TI0 1168 aaPredicted RBP10.63□□□□□ -0.71
CMC1-209ENST00000477739 PPM1KQ8N3J5 372 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 CCT8L2Q96SF2 557 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 LRRC27Q9C0I9 530 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 TRPC5Q9UL62 973 aaPredicted RBP10.63□□□□□ -0.71
CMC1-209ENST00000477739 MYH6P13533 1939 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 A0A087WUV0 522 aaPredicted RBP10.63□□□□□ -0.71
CMC1-209ENST00000477739 ZNF233A6NK53 670 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 TCP10L2B9ZVM9 353 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 EPB41P11171 864 aaKnown RBP10.63□□□□□ -0.71
CMC1-209ENST00000477739 KRT5P13647 590 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 PPP1R2P41236 205 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 QRICH1Q2TAL8 776 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 LMBRD2Q68DH5 695 aaPredicted RBP10.63□□□□□ -0.71
CMC1-209ENST00000477739 CACNA1SQ13698 1873 aa10.63□□□□□ -0.71
CMC1-209ENST00000477739 GOLGA8KD6RF30 607 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 TLR2O60603 784 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 SKAP2O75563 359 aaPredicted RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 DLATP10515 647 aaKnown RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 CERKLQ49MI3 558 aaPredicted RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 SLFN13Q68D06 897 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 HIBCHQ6NVY1 386 aaPredicted RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 EFCAB13Q8IY85 973 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 BANK1Q8NDB2 785 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 ELAC2Q9BQ52 826 aaKnown RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 HEMGNQ9BXL5 484 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 JMJD4Q9H9V9 463 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 DBR1Q9UK59 544 aaKnown RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 UTP11Q9Y3A2 253 aaKnown RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 NR2E1Q9Y466 385 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 CEP83Q9Y592 693 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 CCDC169A6NNP5 214 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 OPLAHO14841 1288 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 SERPING1P05155 500 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 HNRNPH1P31943 449 aaKnown RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 GBP2P32456 591 aaPredicted RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 PEX19P40855 299 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 GCLMP48507 274 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 ERVK-9P63128 1117 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 ZNF571Q7Z3V5 609 aaPredicted RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 REEP2Q9BRK0 252 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 ATP6V0A2Q9Y487 856 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 PHLPP1O60346 1717 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 AHDC1Q5TGY3 1603 aaPredicted RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 UPP2O95045 317 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 ZNF543Q08ER8 600 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 CDC37Q16543 378 aaPredicted RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 GRIPAP1Q4V328 841 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 ODR4Q5SWX8 454 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 GPATCH4Q5T3I0 446 aaKnown RBP10.62□□□□□ -0.71
CMC1-209ENST00000477739 EP400NLQ6ZTU2 488 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 KIF2BQ8N4N8 673 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 METTL13Q8N6R0 699 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 C7orf25Q9BPX7 421 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 KLHL11Q9NVR0 708 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 STK17AQ9UEE5 414 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 ASIC3Q9UHC3 531 aa10.62□□□□□ -0.71
CMC1-209ENST00000477739 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.62□□□□□ -0.71
CMC1-209ENST00000477739 GRID2IPA4D2P6 1211 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 M0R2N6 131 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 TUBBP07437 444 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 MAP2K2P36507 400 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 STAT1P42224 750 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 CYP4F22Q6NT55 531 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 CDC42EP5Q6NZY7 148 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 NLRP14Q86W24 1093 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 CPNE8Q86YQ8 564 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 SP8Q8IXZ3 490 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 SLC30A5Q8TAD4 765 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 ZNF473Q8WTR7 871 aaKnown RBP10.61□□□□□ -0.71
CMC1-209ENST00000477739 HAUS1Q96CS2 278 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 ZNF668Q96K58 619 aaPredicted RBP10.61□□□□□ -0.71
CMC1-209ENST00000477739 RPGRIP1Q96KN7 1286 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 LRRC4CQ9HCJ2 640 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 ANKRD62A6NC57 917 aa10.61□□□□□ -0.71
CMC1-209ENST00000477739 FLOT1O75955 427 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms