RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 DEFB103AP81534 67 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 TNFAIP2Q03169 654 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 TMEM63BQ5T3F8 832 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 SNRNP48Q6IEG0 339 aaKnown RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 FAM117BQ6P1L5 589 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 ELMSAN1Q6PJG2 1045 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 C20orf204Q6ZNR8 217 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 ARMCX2Q7L311 632 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 TTC6Q86TZ1 520 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 TLK2Q86UE8 772 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 CCDC144CPQ8IYA2 1237 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 FGD4Q96M96 766 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 CRBNQ96SW2 442 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 OSMRQ99650 979 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 PRRX2Q99811 253 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 DUSP9Q99956 384 aaKnown RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 AP5M1Q9H0R1 490 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 ABHD16BQ9H3Z7 469 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 PIH1D3Q9NQM4 214 aaKnown RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 TLR9Q9NR96 1032 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 DZANK1Q9NVP4 752 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 ADAMTS5Q9UNA0 930 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 TRIM33Q9UPN9 1127 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 FAM50BQ9Y247 325 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 RIPK3Q9Y572 518 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 MYH1P12882 1939 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 COL11A1P12107 1806 aaPredicted RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 FOCADQ5VW36 1801 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 TET1Q8NFU7 2136 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 DMXL1Q9Y485 3027 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 MYO15AQ9UKN7 3530 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 SPTBN2O15020 2390 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 LINC01553A4QN01 128 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 METTL12A8MUP2 240 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 M0R082 166 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 WDR46O15213 610 aaKnown RBP7.37□□□□□ -1.23
LINC00173-202ENST00000477702 IQCF3P0C7M6 154 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 UQCRFS1P1P0C7P4 283 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 EDN3P14138 238 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 WDR5P61964 334 aaKnown RBP7.37□□□□□ -1.23
LINC00173-202ENST00000477702 NKX3-2P78367 333 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 COL19A1Q14993 1142 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 TCEAL5Q5H9L2 206 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 FAM47CQ5HY64 1035 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 FAM83BQ5T0W9 1011 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 BMP8AQ7Z5Y6 402 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 WDR63Q8IWG1 891 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 FBXL6Q8N531 539 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 ZSCAN1Q8NBB4 408 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 REPS2Q8NFH8 660 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 ZNF417Q8TAU3 575 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.37□□□□□ -1.23
LINC00173-202ENST00000477702 SPACA7Q96KW9 195 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 ZNF587Q96SQ5 575 aaPredicted RBP7.37□□□□□ -1.23
LINC00173-202ENST00000477702 C17orf80Q9BSJ5 609 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 TEX13BQ9BXU2 312 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 KATNBL1Q9H079 304 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 VCPKMTQ9H867 229 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 CLDND1Q9NY35 253 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 PPP1R9AQ9ULJ8 1098 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 TMX2Q9Y320 296 aa7.37□□□□□ -1.23
LINC00173-202ENST00000477702 PRR23AA6NEV1 266 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 ZEB2O60315 1214 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 GADD45BO75293 160 aaPredicted RBP7.36□□□□□ -1.23
LINC00173-202ENST00000477702 SUPT20HL2P0C7V6 817 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 CYP2D6P10635 497 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 RFC2P35250 354 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 COPB2P35606 906 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 SNRPNP63162 240 aaKnown RBP7.36□□□□□ -1.23
LINC00173-202ENST00000477702 CNTN2Q02246 1040 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 ICA1Q05084 483 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 PKN1Q16512 942 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 PCSK7Q16549 785 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 CCDC184Q52MB2 194 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 TTC39AQ5SRH9 613 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 CEP135Q66GS9 1140 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 TMEM179Q6ZVK1 233 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 CPXCR1Q8N123 301 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 ANKRD35Q8N283 1001 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 NEDD1Q8NHV4 660 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 PABPC5Q96DU9 382 aaKnown RBP7.36□□□□□ -1.23
LINC00173-202ENST00000477702 MRPL38Q96DV4 380 aaKnown RBP7.36□□□□□ -1.23
LINC00173-202ENST00000477702 DYNLL2Q96FJ2 89 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 NUP88Q99567 741 aaPredicted RBP7.36□□□□□ -1.23
LINC00173-202ENST00000477702 POP1Q99575 1024 aaKnown RBP7.36□□□□□ -1.23
LINC00173-202ENST00000477702 RAD9AQ99638 391 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 FSD1Q9BTV5 496 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 PRKRIP1Q9H875 184 aaPredicted RBP7.36□□□□□ -1.23
LINC00173-202ENST00000477702 JPH1Q9HDC5 661 aaPredicted RBP7.36□□□□□ -1.23
LINC00173-202ENST00000477702 PDGFCQ9NRA1 345 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 PLXNA3P51805 1871 aa7.36□□□□□ -1.23
LINC00173-202ENST00000477702 PTPRSQ13332 1948 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 PTPRCP08575 1304 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 STXBP3O00186 592 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
LINC00173-202ENST00000477702 PRPF40AO75400 957 aaKnown RBP7.35□□□□□ -1.23
LINC00173-202ENST00000477702 IDH1O75874 414 aaKnown RBP7.35□□□□□ -1.23
LINC00173-202ENST00000477702 RGS9O75916 674 aaPredicted RBP7.35□□□□□ -1.23
LINC00173-202ENST00000477702 BAIAP3O94812 1187 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms