RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 METTL13Q8N6R0 699 aa14.75□□□□□ -0.05
HLA-DMA-208ENST00000477541 SCFD1Q8WVM8 642 aa14.75□□□□□ -0.05
HLA-DMA-208ENST00000477541 HES6Q96HZ4 224 aa14.75□□□□□ -0.05
HLA-DMA-208ENST00000477541 PACSIN1Q9BY11 444 aa14.75□□□□□ -0.05
HLA-DMA-208ENST00000477541 STMN4Q9H169 189 aaPredicted RBP14.75□□□□□ -0.05
HLA-DMA-208ENST00000477541 TMEM260Q9NX78 707 aa14.75□□□□□ -0.05
HLA-DMA-208ENST00000477541 PCDHA12Q9UN75 941 aa14.75□□□□□ -0.05
HLA-DMA-208ENST00000477541 GOLGA6L10A0A0M3HER8 536 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 EDIL3O43854 480 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 ITIH4Q14624 930 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 HERC4Q5GLZ8 1057 aaPredicted RBP14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 PTF1AQ7RTS3 328 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 SLFN12Q8IYM2 578 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 ANKS4BQ8N8V4 417 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 UBLCP1Q8WVY7 318 aaPredicted RBP14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 HAS1Q92839 578 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 PGM2Q96G03 612 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 CEP95Q96GE4 821 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 TXLNGYQ9BZA5 131 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 MCM8Q9UJA3 840 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 AMFRQ9UKV5 643 aa14.74□□□□□ -0.05
HLA-DMA-208ENST00000477541 ASAP2O43150 1006 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 MARCH6O60337 910 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 XRCC5P13010 732 aaKnown RBP14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 EZRP15311 586 aaKnown RBP14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 CYP11B2P19099 503 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 LMNB1P20700 586 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 NR2F2P24468 414 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 JAM2P57087 298 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 NFIL3Q16649 462 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 ERMARDQ5T6L9 678 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 CYB5D1Q6P9G0 228 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 GPBP1Q86WP2 473 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 FUKQ8N0W3 1084 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 SLC44A5Q8NCS7 719 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 RAPGEF5Q92565 580 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 CHMP6Q96FZ7 201 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 MBOAT7Q96N66 472 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 NUDT12Q9BQG2 462 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 TMEM109Q9BVC6 243 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 CARD9Q9H257 536 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 CCDC134Q9H6E4 229 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 RASAL2Q9UJF2 1139 aa14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 PACSIN2Q9UNF0 486 aaPredicted RBP14.73□□□□□ -0.05
HLA-DMA-208ENST00000477541 CYP3A7-CYP3A51PA0A087WV96 503 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 CCDC169A6NNP5 214 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 TBX3O15119 743 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 CYP3A7P24462 503 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 TNNI2P48788 182 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 PTENP60484 403 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 POU5F1Q01860 360 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 KNOP1Q1ED39 458 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 KRT71Q3SY84 523 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 GPATCH4Q5T3I0 446 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 TPTE2Q6XPS3 522 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 EPM2AIP1Q7L775 607 aaPredicted RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 NT5DC3Q86UY8 548 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 MAPKAPK5Q8IW41 473 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 GLIS3Q8NEA6 775 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 ERMNQ8TAM6 284 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 RUNDC3BQ96NL0 473 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 FMO2Q99518 471 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 JPH2Q9BR39 696 aaPredicted RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 OSBPL7Q9BZF2 842 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 DONSONQ9NYP3 566 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 PARP2Q9UGN5 583 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 NARFQ9UHQ1 456 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 CNOT7Q9UIV1 285 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 CFAP73A6NFT4 308 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 USP17L5A8MUK1 530 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 TMEM253P0C7T8 217 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 DRD4P21917 467 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 PON1P27169 355 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 NF2P35240 595 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 SCTRP47872 440 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 MMP14P50281 582 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 EPHA7Q15375 998 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 RC3H1Q5TC82 1133 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 BTNL9Q6UXG8 535 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 CPLX4Q7Z7G2 160 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 TEX11Q8IYF3 940 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 CCDC197Q8NCU1 140 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 CCT6BQ92526 530 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 VTI1AQ96AJ9 217 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 XPO6Q96QU8 1125 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 SETDB2Q96T68 719 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 CENPHQ9H3R5 247 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 TYW1Q9NV66 732 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 MTMR4Q9NYA4 1195 aa14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 NOVA2Q9UNW9 492 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-208ENST00000477541 IGKV6D-41A0A0C4DH26 115 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 DAPK3O43293 454 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 MGRN1O60291 552 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 KRT18P05783 430 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 RFX1P22670 979 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 STAT1P42224 750 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 BTDP43251 543 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 DNA2P51530 1060 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 SLC12A3P55017 1021 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 HADHBP55084 474 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms