RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 CKBP12277 381 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 TMOD1P28289 359 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 CYP2C18P33260 490 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 LONP1P36776 959 aaKnown RBP14.68□□□□□ -0.06
TOP3A-205ENST00000477508 THPOP40225 353 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 FPGSQ05932 587 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 TBC1D8BQ0IIM8 1120 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 PPIGQ13427 754 aaKnown RBP eCLIP14.68□□□□□ -0.066e-9■■■■■ 32.8
TOP3A-205ENST00000477508 CTTNQ14247 550 aaKnown RBP14.68□□□□□ -0.06
TOP3A-205ENST00000477508 SLC39A14Q15043 492 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 PTPAQ15257 358 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 TARBP2Q15633 366 aaKnown RBP14.68□□□□□ -0.06
TOP3A-205ENST00000477508 TRIM71Q2Q1W2 868 aaKnown RBP14.68□□□□□ -0.06
TOP3A-205ENST00000477508 FAM173BQ6P4H8 233 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 ANO5Q75V66 913 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 TRMT1LQ7Z2T5 733 aaKnown RBP14.68□□□□□ -0.06
TOP3A-205ENST00000477508 CATSPER3Q86XQ3 398 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 RPUSD2Q8IZ73 545 aaKnown RBP14.68□□□□□ -0.06
TOP3A-205ENST00000477508 DHX38Q92620 1227 aaKnown RBP14.68□□□□□ -0.06
TOP3A-205ENST00000477508 BADQ92934 168 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 NACC1Q96RE7 527 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 CLIC4Q9Y696 253 aa14.68□□□□□ -0.06
TOP3A-205ENST00000477508 GAS2O43903 313 aaKnown RBP14.67□□□□□ -0.06
TOP3A-205ENST00000477508 YEATS4O95619 227 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 PFKMP08237 780 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 IQCF3P0C7M6 154 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 SPATA31C1P0DKV0 1188 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 ITGB8P26012 769 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 BMP8BP34820 402 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 CCT6AP40227 531 aaKnown RBP14.67□□□□□ -0.06
TOP3A-205ENST00000477508 RFC5P40937 340 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 MAGEA10P43363 369 aaPredicted RBP14.67□□□□□ -0.06
TOP3A-205ENST00000477508 NASPP49321 788 aaPredicted RBP14.67□□□□□ -0.06
TOP3A-205ENST00000477508 PKP1Q13835 747 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 IL17AQ16552 155 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 FOXD4L5Q5VV16 416 aaPredicted RBP14.67□□□□□ -0.06
TOP3A-205ENST00000477508 IER5Q5VY09 327 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 LRRC8DQ7L1W4 858 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 SNX29Q8TEQ0 813 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 TRAPPC12Q8WVT3 735 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 FOXD4L4Q8WXT5 416 aaPredicted RBP14.67□□□□□ -0.06
TOP3A-205ENST00000477508 CEP170P1Q96L14 293 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 CCDC43Q96MW1 224 aaKnown RBP14.67□□□□□ -0.06
TOP3A-205ENST00000477508 USP28Q96RU2 1077 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 GDF15Q99988 308 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 CYP26B1Q9NR63 512 aa14.67□□□□□ -0.06
TOP3A-205ENST00000477508 SRPRBQ9Y5M8 271 aaKnown RBP14.67□□□□□ -0.06
TOP3A-205ENST00000477508 KDM3AQ9Y4C1 1321 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 RSPH10B2B2RC85 870 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 M0QZ92 97 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 C22orf31O95567 290 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 RSPH10BP0C881 870 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 UBA7P41226 1012 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 DNM2P50570 870 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 CCL23P55773 120 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 CDC42EP1Q00587 391 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 MDM2Q00987 491 aaPredicted RBP14.66□□□□□ -0.06
TOP3A-205ENST00000477508 STK38Q15208 465 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 MTERF2Q49AM1 385 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 XKR9Q5GH70 373 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 FAM26DQ5JW98 314 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 FAM43BQ6ZT52 329 aaPredicted RBP14.66□□□□□ -0.06
TOP3A-205ENST00000477508 METTL13Q8N6R0 699 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 DNAJB3Q8WWF6 145 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 SLC7A3Q8WY07 619 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 MAP7D2Q96T17 732 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 NT5C3AQ9H0P0 336 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 WNT8AQ9H1J5 351 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 WRAP73Q9P2S5 460 aaPredicted RBP14.66□□□□□ -0.06
TOP3A-205ENST00000477508 DBR1Q9UK59 544 aaKnown RBP14.66□□□□□ -0.06
TOP3A-205ENST00000477508 LTBP2Q14767 1821 aa14.66□□□□□ -0.06
TOP3A-205ENST00000477508 PPP6R2O75170 966 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 MAFO75444 373 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-205ENST00000477508 MED24O75448 989 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 CEBPZQ03701 1054 aaKnown RBP14.65□□□□□ -0.06
TOP3A-205ENST00000477508 ZNF618Q5T7W0 954 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 EFCAB12Q6NXP0 572 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 RUFY4Q6ZNE9 571 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 KRI1Q8N9T8 703 aaKnown RBP14.65□□□□□ -0.06
TOP3A-205ENST00000477508 LINC00301Q8NCQ3 95 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 KCNG4Q8TDN1 519 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 WNT8BQ93098 351 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 CDK5RAP3Q96JB5 506 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 FTOQ9C0B1 505 aaKnown RBP eCLIP14.65□□□□□ -0.06
TOP3A-205ENST00000477508 UBE2OQ9C0C9 1292 aaKnown RBP14.65□□□□□ -0.06
TOP3A-205ENST00000477508 FAM49AQ9H0Q0 323 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-205ENST00000477508 IL23AQ9NPF7 189 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 TFIP11Q9UBB9 837 aaKnown RBP14.65□□□□□ -0.06
TOP3A-205ENST00000477508 CIZ1Q9ULV3 898 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-205ENST00000477508 DNM3Q9UQ16 869 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 ZDHHC9Q9Y397 364 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 UMODL1Q5DID0 1318 aa14.65□□□□□ -0.06
TOP3A-205ENST00000477508 MYH15Q9Y2K3 1946 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 IGKV6-21A0A0C4DH24 114 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 A0A1W2PPC1 479 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 SPTLC2O15270 562 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 DGAT1O75907 488 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 CSF2RAP15509 400 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 DDIT3P35638 169 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 POLGP54098 1239 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms