RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 FAM50BQ9Y247 325 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 GINS2Q9Y248 185 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 SNX14Q9Y5W7 946 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 FAM86C2PA6NEL3 165 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 ZBTB42B2RXF5 422 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 PRPF3O43395 683 aaKnown RBP12.9□□□□□ -0.34
HDLBP-236ENST00000477477 CSPG5O95196 566 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 C22orf31O95567 290 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 GNA11P29992 359 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 CIITAP33076 1130 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 LTBRP36941 435 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 PLA2G5P39877 138 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 SARSP49591 514 aaKnown RBP12.9□□□□□ -0.34
HDLBP-236ENST00000477477 NFX1Q12986 1120 aaKnown RBP12.9□□□□□ -0.34
HDLBP-236ENST00000477477 CAMK1Q14012 370 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 PAN2Q504Q3 1202 aaKnown RBP12.9□□□□□ -0.34
HDLBP-236ENST00000477477 NAALADL2Q58DX5 795 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 ZNF746Q6NUN9 644 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-236ENST00000477477 TMEM40Q8WWA1 233 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 PHKBQ93100 1093 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 UIMC1Q96RL1 719 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 AGXT2Q9BYV1 514 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.34
HDLBP-236ENST00000477477 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
HDLBP-236ENST00000477477 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.34
HDLBP-236ENST00000477477 MAFBQ9Y5Q3 323 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-236ENST00000477477 MGEA5O60502 916 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 RPS6KA5O75582 802 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 ITGB1P05556 798 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 DNAJB1P25685 340 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 GATMP50440 423 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 ZP2Q05996 745 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 NTRK3Q16288 839 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 PRR16Q569H4 304 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 ODR4Q5SWX8 454 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 CKAP2LQ8IYA6 745 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 SMAP1Q8IYB5 467 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-236ENST00000477477 SPPL3Q8TCT6 385 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 RASGRP4Q8TDF6 673 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-236ENST00000477477 RNF26Q9BY78 433 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-236ENST00000477477 PRKAG3Q9UGI9 489 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 TCEAL9Q9UHQ7 104 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 LRFN2Q9ULH4 789 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 HCN4Q9Y3Q4 1203 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 MYO7AQ13402 2215 aa12.89□□□□□ -0.35
HDLBP-236ENST00000477477 DENND3A2RUS2 1198 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 GPR182O15218 404 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 TBX10O75333 385 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 PSAPP07602 524 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 GTF2F1P35269 517 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDLBP-236ENST00000477477 CRYBB1P53674 252 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-236ENST00000477477 AKAP17AQ02040 695 aaKnown RBP12.88□□□□□ -0.35
HDLBP-236ENST00000477477 DLX2Q07687 328 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-236ENST00000477477 KIZQ2M2Z5 673 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 ADHFE1Q8IWW8 467 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 KLHL23Q8NBE8 558 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 CCDC148Q8NFR7 591 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 BICD2Q8TD16 824 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 POF1BQ8WVV4 589 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 LENG9Q96B70 501 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 FAM122AQ96E09 287 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 PPP1R16BQ96T49 567 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 ADAM2Q99965 735 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 RGS18Q9NS28 235 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 C1orf112Q9NSG2 853 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 CEP131Q9UPN4 1083 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 ARIH1Q9Y4X5 557 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-236ENST00000477477 PCDHA10Q9Y5I2 948 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
HDLBP-236ENST00000477477 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 C9IYK1 514 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 LINC01565O15544 149 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 MBTPS2O43462 519 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 PPFIA3O75145 1194 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 GPR32O75388 356 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 VTNP04004 478 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 ALADP13716 330 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 IFNAR1P17181 557 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 IBSPP21815 317 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-236ENST00000477477 PSMA5P28066 241 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 IRS1P35568 1242 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 CLUL1Q15846 466 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 SLC24A5Q71RS6 500 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 ADGRD2Q7Z7M1 963 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 FAM228AQ86W67 206 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 FAM167AQ96KS9 214 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 OSMRQ99650 979 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 SLC26A6Q9BXS9 759 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 IGFLR1Q9H665 355 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-236ENST00000477477 VPS54Q9P1Q0 977 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 GABBR1Q9UBS5 961 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 ST3GAL5Q9UNP4 418 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 SAMM50Q9Y512 469 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 PCDHB7Q9Y5E2 793 aa12.87□□□□□ -0.35
HDLBP-236ENST00000477477 TBKBP1A7MCY6 615 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms