RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 BTBD8Q5XKL5 378 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 OTOP2Q7RTS6 562 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 ZNF654Q8IZM8 581 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 MIEF2Q96C03 454 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 WNK4Q96J92 1243 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 INCENPQ9NQS7 918 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 GALNT8Q9NY28 637 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 FAM184BQ9ULE4 1060 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 A0A0G2JNJ9 132 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 A0A1W2PRX2 142 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 TCRBV5S4A2TA0A5A2 114 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 B2RBV5 119 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 PTGS1P23219 599 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 STAT3P40763 770 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 CD83Q01151 205 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 RSPO2Q6UXX9 243 aaPredicted RBP4.46□□□□□ -1.7
XRN1-211ENST00000477237 LBX2Q6XYB7 198 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 USP53Q70EK8 1073 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 ZNF276Q8N554 614 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 PROKR1Q8TCW9 393 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 KCTD13Q8WZ19 329 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 PRDM13Q9H4Q3 707 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 Q9UFV3 132 aa4.46□□□□□ -1.7
XRN1-211ENST00000477237 PROB1E7EW31 1015 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 ZNF16P17020 682 aaPredicted RBP4.45□□□□□ -1.7
XRN1-211ENST00000477237 PTPN1P18031 435 aaKnown RBP4.45□□□□□ -1.7
XRN1-211ENST00000477237 NR4A1P22736 598 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 MC4RP32245 332 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 STAT5BP51692 787 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 PTPAQ15257 358 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 KIZQ2M2Z5 673 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 RABL3Q5HYI8 236 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 LY6G5CQ5SRR4 150 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 HECTD2Q5U5R9 776 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 TMEM200BQ69YZ2 307 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 KCNT2Q6UVM3 1135 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 FAM178BQ8IXR5 827 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 GPR87Q9BY21 358 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 R3HDMLQ9H3Y0 253 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 TOR3AQ9H497 397 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 TRPS1Q9UHF7 1281 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 COX11Q9Y6N1 276 aa4.45□□□□□ -1.7
XRN1-211ENST00000477237 DLX3O60479 287 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 ACAP1Q15027 740 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 KANK2Q63ZY3 851 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 LRSAM1Q6UWE0 723 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 GSPT2Q8IYD1 628 aaKnown RBP4.44□□□□□ -1.7
XRN1-211ENST00000477237 SYNE4Q8N205 404 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 BEND2Q8NDZ0 799 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 RABGGTAQ92696 567 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 ANAPC16Q96DE5 110 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 IER2Q9BTL4 223 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 BTBD2Q9BX70 525 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 RIC8BQ9NVN3 520 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 FZD1Q9UP38 647 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 HS3ST4Q9Y661 456 aa4.44□□□□□ -1.7
XRN1-211ENST00000477237 KLRG2A4D1S0 409 aaPredicted RBP4.43□□□□□ -1.7
XRN1-211ENST00000477237 MPIG6BO95866 241 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 ABHD16AO95870 558 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 SOD2P04179 222 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 ITGB1P05556 798 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 AOAHP28039 575 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 RABGGTBP53611 331 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 PPP2R2AP63151 447 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 MRM1Q6IN84 353 aaKnown RBP4.43□□□□□ -1.7
XRN1-211ENST00000477237 RD3Q7Z3Z2 195 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 AMNQ9BXJ7 453 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 IPPKQ9H8X2 491 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 BTBD7Q9P203 1132 aa4.43□□□□□ -1.7
XRN1-211ENST00000477237 ATP2C1P98194 919 aaPredicted RBP4.42□□□□□ -1.7
XRN1-211ENST00000477237 MOGSQ13724 837 aa4.42□□□□□ -1.7
XRN1-211ENST00000477237 ELAVL1Q15717 326 aaKnown RBP4.42□□□□□ -1.7
XRN1-211ENST00000477237 KCNV1Q6PIU1 500 aa4.42□□□□□ -1.7
XRN1-211ENST00000477237 THAP3Q8WTV1 239 aaPredicted RBP4.42□□□□□ -1.7
XRN1-211ENST00000477237 SRPK3Q9UPE1 567 aa4.42□□□□□ -1.7
XRN1-211ENST00000477237 FAM47E-STBD1D6RA91 191 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 B3GALT2O43825 422 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 ECE1P42892 770 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 GJA8P48165 433 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 ST5P78524 1137 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 ADAM15Q13444 863 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 NBPF6Q5VWK0 638 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 LARP1BQ659C4 914 aaKnown RBP4.41□□□□□ -1.7
XRN1-211ENST00000477237 LRRC55Q6ZSA7 311 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 MICALCLQ6ZW33 695 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 DCAF4Q8WV16 495 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 PGBD4Q96DM1 585 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 NBPF4Q96M43 638 aa4.41□□□□□ -1.7
XRN1-211ENST00000477237 CTDP1Q9Y5B0 961 aaPredicted RBP4.41□□□□□ -1.7
XRN1-211ENST00000477237 GRXCR1A8MXD5 290 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 RGS19P49795 217 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 ADCY7P51828 1080 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 KRTAP10-6P60371 365 aaPredicted RBP4.4□□□□□ -1.71
XRN1-211ENST00000477237 GPR85P60893 370 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 NTRK3Q16288 839 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 C1QL3Q5VWW1 255 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 GRAMD4Q6IC98 578 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 HTR3DQ70Z44 454 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 NLGN4XQ8N0W4 816 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 GPHA2Q96T91 129 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms