RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ARHGAP39Q9C0H5 1083 aa31.98■■■□□ 2.71
VEGFA-211ENST00000476772 SEPT9Q9UHD8 586 aaPredicted RBP31.98■■■□□ 2.71
VEGFA-211ENST00000476772 ZHX1Q9UKY1 873 aaPredicted RBP31.98■■■□□ 2.71
VEGFA-211ENST00000476772 C11orf97A0A1B0GVM6 126 aaPredicted RBP31.97■■■□□ 2.71
VEGFA-211ENST00000476772 SFI1A8K8P3 1242 aa31.97■■■□□ 2.71
VEGFA-211ENST00000476772 ATP1A3P13637 1013 aa31.97■■■□□ 2.71
VEGFA-211ENST00000476772 ARHGAP1Q07960 439 aa31.97■■■□□ 2.71
VEGFA-211ENST00000476772 CCL14Q16627 93 aa31.97■■■□□ 2.71
VEGFA-211ENST00000476772 PDLIM2Q96JY6 352 aa31.97■■■□□ 2.71
VEGFA-211ENST00000476772 APBA2Q99767 749 aa31.97■■■□□ 2.71
VEGFA-211ENST00000476772 TRIM5Q9C035 493 aa31.97■■■□□ 2.71
VEGFA-211ENST00000476772 SAMSN1Q9NSI8 373 aaKnown RBP31.97■■■□□ 2.71
VEGFA-211ENST00000476772 HIP1RO75146 1068 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 TBC1D8O95759 1140 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 GAP43P17677 238 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 FCGRTP55899 365 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 LACTBP83111 547 aaPredicted RBP31.96■■■□□ 2.71
VEGFA-211ENST00000476772 HSP90AA4PQ58FG1 418 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 XKR3Q5GH77 459 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 FAM160B1Q5W0V3 765 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 P2RX5Q93086 422 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 CEP170P1Q96L14 293 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 PPP1R9BQ96SB3 815 aa31.96■■■□□ 2.71
VEGFA-211ENST00000476772 CCNE1P24864 410 aa31.95■■■□□ 2.71
VEGFA-211ENST00000476772 PSMC4P43686 418 aa31.95■■■□□ 2.71
VEGFA-211ENST00000476772 ZNF131P52739 623 aa31.95■■■□□ 2.71
VEGFA-211ENST00000476772 MAPK7Q13164 816 aa31.95■■■□□ 2.71
VEGFA-211ENST00000476772 MAEAQ7L5Y9 396 aa31.95■■■□□ 2.71
VEGFA-211ENST00000476772 AFAP1L1Q8TED9 768 aa31.95■■■□□ 2.71
VEGFA-211ENST00000476772 PARVGQ9HBI0 331 aa31.95■■■□□ 2.71
VEGFA-211ENST00000476772 GH1P01241 217 aa31.95■■■□□ 2.7
VEGFA-211ENST00000476772 OATP04181 439 aa31.95■■■□□ 2.7
VEGFA-211ENST00000476772 ZNF18P17022 549 aa31.95■■■□□ 2.7
VEGFA-211ENST00000476772 STAT5BP51692 787 aa31.95■■■□□ 2.7
VEGFA-211ENST00000476772 HTRA3P83110 453 aa31.95■■■□□ 2.7
VEGFA-211ENST00000476772 TPD52L1Q16890 204 aaPredicted RBP31.95■■■□□ 2.7
VEGFA-211ENST00000476772 MYOCDQ8IZQ8 938 aa31.95■■■□□ 2.7
VEGFA-211ENST00000476772 DAW1Q8N136 415 aa31.95■■■□□ 2.7
VEGFA-211ENST00000476772 TRIM47Q96LD4 638 aa31.95■■■□□ 2.7
VEGFA-211ENST00000476772 MYH11P35749 1972 aa31.94■■■□□ 2.7
VEGFA-211ENST00000476772 VEGFBP49765 207 aa31.94■■■□□ 2.7
VEGFA-211ENST00000476772 ZNF75DP51815 510 aa31.94■■■□□ 2.7
VEGFA-211ENST00000476772 LAMC2Q13753 1193 aa31.94■■■□□ 2.7
VEGFA-211ENST00000476772 OLFML2BQ68BL8 750 aa31.94■■■□□ 2.7
VEGFA-211ENST00000476772 TTI2Q6NXR4 508 aa31.94■■■□□ 2.7
VEGFA-211ENST00000476772 MYCT1Q8N699 235 aa31.94■■■□□ 2.7
VEGFA-211ENST00000476772 LGR5O75473 907 aa31.93■■■□□ 2.7
VEGFA-211ENST00000476772 CASP5P51878 434 aa31.93■■■□□ 2.7
VEGFA-211ENST00000476772 PRAMEF19Q5SWL8 479 aa31.93■■■□□ 2.7
VEGFA-211ENST00000476772 SEMA6BQ9H3T3 888 aa31.93■■■□□ 2.7
VEGFA-211ENST00000476772 AZI2Q9H6S1 392 aa31.93■■■□□ 2.7
VEGFA-211ENST00000476772 CYP26B1Q9NR63 512 aa31.93■■■□□ 2.7
VEGFA-211ENST00000476772 OLFML3Q9NRN5 406 aa31.93■■■□□ 2.7
VEGFA-211ENST00000476772 SMPD1P17405 629 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 CCDC144BQ3MJ40 725 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 CENPPQ6IPU0 288 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 SCFD1Q8WVM8 642 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 MRPL44Q9H9J2 332 aaKnown RBP31.92■■■□□ 2.7
VEGFA-211ENST00000476772 BICDL2A1A5D9 508 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 CYP2C19P33261 490 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 MAP2K2P36507 400 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 FANCCQ00597 558 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 DUSP28Q4G0W2 176 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 ANKRD40Q6AI12 368 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 TRIM50Q86XT4 487 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 EMID1Q96A84 441 aaPredicted RBP31.92■■■□□ 2.7
VEGFA-211ENST00000476772 TIPINQ9BVW5 301 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 SEL1LQ9UBV2 794 aa31.92■■■□□ 2.7
VEGFA-211ENST00000476772 EMSYQ7Z589 1322 aa31.91■■■□□ 2.7
VEGFA-211ENST00000476772 MTERF2Q49AM1 385 aa31.91■■■□□ 2.7
VEGFA-211ENST00000476772 CDKAL1Q5VV42 579 aa31.91■■■□□ 2.7
VEGFA-211ENST00000476772 IQSEC1Q6DN90 963 aa31.91■■■□□ 2.7
VEGFA-211ENST00000476772 GLG1Q92896 1179 aa31.91■■■□□ 2.7
VEGFA-211ENST00000476772 DUSP9Q99956 384 aaKnown RBP31.91■■■□□ 2.7
VEGFA-211ENST00000476772 MYBP10242 640 aa31.9■■■□□ 2.7
VEGFA-211ENST00000476772 EPM2AIP1Q7L775 607 aaPredicted RBP31.9■■■□□ 2.7
VEGFA-211ENST00000476772 CFHR5Q9BXR6 569 aa31.9■■■□□ 2.7
VEGFA-211ENST00000476772 RNF186Q9NXI6 227 aa31.9■■■□□ 2.7
VEGFA-211ENST00000476772 ADCY6O43306 1168 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 TRPA1O75762 1119 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 IGHA2P01877 340 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 CDK11BP21127 795 aaKnown RBP31.89■■■□□ 2.7
VEGFA-211ENST00000476772 IRF5Q13568 498 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 ODR4Q5SWX8 454 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 NELFCDQ8IXH7 590 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 FIZ1Q96SL8 496 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 GPRC5CQ9NQ84 441 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 IFNKQ9P0W0 207 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 GABRQQ9UN88 632 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 GCNT3O95395 438 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 ZNF865P0CJ78 1059 aaPredicted RBP31.89■■■□□ 2.7
VEGFA-211ENST00000476772 SP3Q02447 781 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 PLPPR4Q7Z2D5 763 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 PPTC7Q8NI37 304 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 AFG1LQ8WV93 481 aa31.89■■■□□ 2.7
VEGFA-211ENST00000476772 NIFKQ9BYG3 293 aaKnown RBP31.89■■■□□ 2.7
VEGFA-211ENST00000476772 NKRFO15226 690 aaKnown RBP eCLIP31.88■■■□□ 2.691e-7■□□□□ 10.5
VEGFA-211ENST00000476772 DGAT1O75907 488 aa31.88■■■□□ 2.69
VEGFA-211ENST00000476772 KIF20AO95235 890 aa31.88■■■□□ 2.69
VEGFA-211ENST00000476772 MARK3P27448 753 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 257.5 ms