RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TBCBQ99426 244 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-215ENST00000476664 LPIN3Q9BQK8 851 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 GPR27Q9NS67 375 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 HCSTQ9UBK5 93 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 NOC2LQ9Y3T9 749 aaKnown RBP8.1□□□□□ -1.11
LRCH3-215ENST00000476664 SLC4A7Q9Y6M7 1214 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 CLTCL1P53675 1640 aa8.1□□□□□ -1.11
LRCH3-215ENST00000476664 GOLIM4O00461 696 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 H2AFYO75367 372 aaKnown RBP8.09□□□□□ -1.11
LRCH3-215ENST00000476664 SRGAP2CP0DJJ0 459 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 CDC25BP30305 580 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 LSP1P33241 339 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 GPR3P46089 330 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 CACNB3P54284 484 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 PHC1P78364 1004 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 PPFIA1Q13136 1202 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 TERF2Q15554 542 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 CLEC16AQ2KHT3 1053 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 TUBB8Q3ZCM7 444 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 DGKKQ5KSL6 1271 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 ZNF468Q5VIY5 522 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-215ENST00000476664 CC2D1AQ6P1N0 951 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-215ENST00000476664 TXNDC11Q6PKC3 985 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 OTOP3Q7RTS5 596 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 OVCH2Q7RTZ1 564 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 KRT77Q7Z794 578 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 PTRH1Q86Y79 214 aaKnown RBP8.09□□□□□ -1.11
LRCH3-215ENST00000476664 GRAMD1CQ8IYS0 662 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 FIBCD1Q8N539 461 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 CAMKK1Q8N5S9 505 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 OR2C3Q8N628 320 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 C2orf69Q8N8R5 385 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 GIMAP8Q8ND71 665 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-215ENST00000476664 TNFRSF25Q93038 417 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 C1GALT1C1Q96EU7 318 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 GMCL1Q96IK5 515 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 WDR18Q9BV38 432 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 USP26Q9BXU7 913 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 NUP62CLQ9H1M0 184 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 DISC1Q9NRI5 854 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 PRR13Q9NZ81 148 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 RNF112Q9ULX5 631 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 GPR55Q9Y2T6 319 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-215ENST00000476664 PCDHGB6Q9Y5F9 930 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 PKD1L3Q7Z443 1732 aa8.09□□□□□ -1.11
LRCH3-215ENST00000476664 VIRMAQ69YN4 1812 aaKnown RBP8.08□□□□□ -1.12
LRCH3-215ENST00000476664 ITIH6Q6UXX5 1313 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 PITPNM2Q9BZ72 1349 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 A0A1B0GVC2 190 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 H3BML4 177 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 GDF9O60383 454 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 AOC2O75106 756 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 TUSC2O75896 110 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 CST3P01034 146 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-215ENST00000476664 CTSBP07858 339 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 POU2F2P09086 479 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 MYBP10242 640 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 ITGA6P23229 1130 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 CALRP27797 417 aaKnown RBP8.08□□□□□ -1.12
LRCH3-215ENST00000476664 FAM133BQ5BKY9 247 aaKnown RBP8.08□□□□□ -1.12
LRCH3-215ENST00000476664 CNPY4Q8N129 248 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 KREMEN2Q8NCW0 462 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 RNF214Q8ND24 703 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 PCDH19Q8TAB3 1148 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 JADE3Q92613 823 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 TMEM169Q96HH4 297 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 RIPOR3Q96MK2 946 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 EIF2AK1Q9BQI3 630 aaKnown RBP8.08□□□□□ -1.12
LRCH3-215ENST00000476664 GTPBP4Q9BZE4 634 aaKnown RBP8.08□□□□□ -1.12
LRCH3-215ENST00000476664 VPS11Q9H270 941 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 KIAA1586Q9HCI6 787 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 CCM2LQ9NUG4 571 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-215ENST00000476664 RTEL1Q9NZ71 1219 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 NAGPAQ9UK23 515 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 NHSQ6T4R5 1651 aa8.08□□□□□ -1.12
LRCH3-215ENST00000476664 H7C1D1 291 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 TGM5O43548 720 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 RXRGP48443 463 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 ST5P78524 1137 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 SCRN1Q12765 414 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 INTS11Q5TA45 600 aaKnown RBP8.07□□□□□ -1.12
LRCH3-215ENST00000476664 PRAMEF13Q5VWM6 474 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 MSL1Q68DK7 614 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 DENND5AQ6IQ26 1287 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 OVCH1Q7RTY7 1134 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 DENND1CQ8IV53 801 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 KRT78Q8N1N4 520 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 MYCT1Q8N699 235 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 IL22RA1Q8N6P7 574 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.07□□□□□ -1.12
LRCH3-215ENST00000476664 UNC45AQ9H3U1 944 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 IFT122Q9HBG6 1241 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 TOPORSQ9NS56 1045 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-215ENST00000476664 RAD18Q9NS91 495 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 TFCP2L1Q9NZI6 479 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 H2AFY2Q9P0M6 372 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-215ENST00000476664 NPFFR2Q9Y5X5 522 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 BTAF1O14981 1849 aa8.07□□□□□ -1.12
LRCH3-215ENST00000476664 LMO7Q8WWI1 1683 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms