RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GSTA3Q16772 222 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 STKLD1Q8NE28 680 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 NGDNQ8NEJ9 315 aaKnown RBP14.98□□□□□ -0.01
HDAC1-206ENST00000476391 GRAMD1AQ96CP6 724 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 RMDN2Q96LZ7 410 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 PPP1R12CQ9BZL4 782 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 TMEM165Q9HC07 324 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 CCDC87Q9NVE4 849 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 CEP126Q9P2H0 1117 aa14.98□□□□□ -0.01
HDAC1-206ENST00000476391 LARSQ9P2J5 1176 aaKnown RBP14.98□□□□□ -0.01
HDAC1-206ENST00000476391 ARFGEF2Q9Y6D5 1785 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 CETN3O15182 167 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 EYA4O95677 639 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 ZBTB48P10074 688 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-206ENST00000476391 INHBCP55103 352 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 POU5F1Q01860 360 aaKnown RBP14.97□□□□□ -0.01
HDAC1-206ENST00000476391 MCL1Q07820 350 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 PKN1Q16512 942 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 CNPY1Q3B7I2 92 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 COBLL1Q53SF7 1204 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 RASIP1Q5U651 963 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 PKD1L3Q7Z443 1732 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 PALM3A6NDB9 673 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-206ENST00000476391 RASA1P20936 1047 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 MAGEA10P43363 369 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-206ENST00000476391 LSAMPQ13449 338 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 PPP2R5EQ16537 467 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 C10orf76Q5T2E6 689 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 SFMBT2Q5VUG0 894 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 MFSD5Q6N075 450 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 ZNF654Q8IZM8 581 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 RNF25Q96BH1 459 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-206ENST00000476391 PPP1R14BQ96C90 147 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 SPATA16Q9BXB7 569 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 CARD9Q9H257 536 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 ZDHHC18Q9NUE0 388 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 SEC63Q9UGP8 760 aaKnown RBP14.97□□□□□ -0.01
HDAC1-206ENST00000476391 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
HDAC1-206ENST00000476391 ATP9AO75110 1047 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 RASSF2P50749 326 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 SCARF1Q14162 830 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 SLC29A2Q14542 456 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 UBE3CQ15386 1083 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 Q4G0T1 1027 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 METTL13Q8N6R0 699 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 ANKLE1Q8NAG6 615 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 SUPT20HQ8NEM7 779 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 LRRC8CQ8TDW0 803 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 MIS12Q9H081 205 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 MAGEF1Q9HAY2 307 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 CEP72Q9P209 647 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 ATP6V0A2Q9Y487 856 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 C5P01031 1676 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 FGFR1OPO95684 399 aaKnown RBP14.96□□□□□ -0.01
HDAC1-206ENST00000476391 OATP04181 439 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 RPL13P26373 211 aaKnown RBP14.96□□□□□ -0.01
HDAC1-206ENST00000476391 HLFQ16534 295 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 AKNAD1Q5T1N1 836 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 CCNJLQ8IV13 435 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 CKAP2Q8WWK9 683 aa14.96□□□□□ -0.01
HDAC1-206ENST00000476391 NKRFO15226 690 aaKnown RBP eCLIP14.95□□□□□ -0.02
HDAC1-206ENST00000476391 MGAT5Q09328 741 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 DUPD1Q68J44 220 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 INTS8Q75QN2 995 aaKnown RBP14.95□□□□□ -0.02
HDAC1-206ENST00000476391 LRP10Q7Z4F1 713 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 ECHDC2Q86YB7 292 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 PROCA1Q8NCQ7 364 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-206ENST00000476391 NR1H4Q96RI1 486 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-206ENST00000476391 CELF4Q9BZC1 486 aaKnown RBP14.95□□□□□ -0.02
HDAC1-206ENST00000476391 CUEDC2Q9H467 287 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 LTN1O94822 1766 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 ITGA4P13612 1032 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 DRG2P55039 364 aaKnown RBP14.95□□□□□ -0.02
HDAC1-206ENST00000476391 PDE4DQ08499 809 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 MFSD6Q6ZSS7 791 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 CEP128Q6ZU80 1094 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 RNF168Q8IYW5 571 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-206ENST00000476391 LRRC57Q8N9N7 239 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 LZTS2Q9BRK4 669 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 NLRC4Q9NPP4 1024 aa14.95□□□□□ -0.02
HDAC1-206ENST00000476391 SMIM23A6NLE4 172 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 ATP5J2-PTCD1G3V325 749 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 H0Y3Z8 333 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 RASGRF2O14827 1237 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 TLR2O60603 784 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 PTCD1O75127 700 aaKnown RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 ADORA1P30542 326 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 MCM7P33993 719 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 KLRC3Q07444 240 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 AUHQ13825 339 aaKnown RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 NPY5RQ15761 445 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 CENPPQ6IPU0 288 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 EXOC3L1Q86VI1 746 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 VSIG1Q86XK7 387 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 ANKLE2Q86XL3 938 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 SMC1BQ8NDV3 1235 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 IP6K1Q92551 441 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 ERP44Q9BS26 406 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 TBC1D10AQ9BXI6 508 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms